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Add clean_decontam target #408

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Ulthran
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@Ulthran Ulthran commented Aug 16, 2023

  • I have run pytest .tests/ on a local deployment and the tests passed successfully
  • If this adds a new output file, I have added a check to .tests/targets.txt
  • If this fixes a bug, I have added or modified an appropriate test
  • If this adds or modifies a rule that uses FASTQ files, the input accepts gzipped FASTQ and outputs gzipped FASTQ, or marks uncompressed FASTQ output as temp

If this is for a release:

  • I have updated documentation
  • I have updated the hardcoded version at the top of install.sh to match what this release's version will be
  • I have created a release archive that will be attached to this release

@Ulthran Ulthran merged commit f7ed98b into main Oct 5, 2023
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@Ulthran Ulthran deleted the 275-any-way-to-remove-temporary-files-for-all_decontam branch October 5, 2023 19:42
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Any way to remove temporary files for all_decontam?
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