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Consider adding Node metadata #91

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kevinkle opened this issue Jun 25, 2019 · 1 comment

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kevinkle commented Jun 25, 2019

The idea would be, something like:

for node A, has attributes MIC_AMP_1: some number of genomes, MIC_AMP_2: some number of genomes.

We could do this after the fact to by going through the graph and for each node: query all its edges and lookup associated MIC/metadata value.

We could also do this as we add genomes / when we update the graph with new genomes.

This might be useful for some GWAS work, such as finding which nodes (kmers) and paths are most associated with which phenotypes

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kevinkle commented Jun 25, 2019

Look more into scoary

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