Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add support for the Kumar Lab's JABS format #63

Merged
merged 20 commits into from
Sep 20, 2023
Merged

Add support for the Kumar Lab's JABS format #63

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
20 commits
Select commit Hold shift + click to select a range
ce5ffe9
Adding read functions for jabs pose files
SkepticRaven Aug 29, 2023
ece51ae
Figured out track and adding function into init
SkepticRaven Aug 29, 2023
f579d24
pose_v3 export mostly working. Adding some structure for other pose v…
SkepticRaven Aug 30, 2023
ff91485
Bugfix on sorting out tracks
SkepticRaven Aug 30, 2023
52451f7
Adding in writing out JABS pose versions
SkepticRaven Aug 31, 2023
abaa5a6
Fixing a pose_v4 field and beginning to address some todos
SkepticRaven Sep 5, 2023
82141bd
updating todos
SkepticRaven Sep 6, 2023
5a4ff1d
Adding static object support
SkepticRaven Sep 7, 2023
e9de2a2
Cleanup of todos and removing some unused variables when writing h5 f…
SkepticRaven Sep 7, 2023
0639606
Ran black
SkepticRaven Sep 7, 2023
66f6d10
conforming to linter
SkepticRaven Sep 12, 2023
66c64eb
pep8 linting
SkepticRaven Sep 12, 2023
946e511
Tentative solution for jabs v3 complaince. Needs testing...
SkepticRaven Sep 13, 2023
e99b3f7
Merge branch 'main' into add_jabs
SkepticRaven Sep 14, 2023
79999e3
Starting to write some tests
SkepticRaven Sep 14, 2023
6a4cb04
Making tests actually correct and fixing a bug discovered with the a …
SkepticRaven Sep 15, 2023
abeab8c
Adding tests for reading/writing jabs files from main
SkepticRaven Sep 15, 2023
70042d3
Enforcing 12 keypoints with a warning. Removing an unecessary check (…
SkepticRaven Sep 18, 2023
31ec9e3
Being more explicit with some checks. One bugfix with reading v2 files.
SkepticRaven Sep 20, 2023
3fea3bd
Bot caught this one - checks were in correct order, but raised errors…
SkepticRaven Sep 20, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 2 additions & 0 deletions sleap_io/__init__.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -22,4 +22,6 @@
save_nwb,
load_labelstudio,
save_labelstudio,
load_jabs,
save_jabs,
)
Loading