Merge pull request #362 from davidealbanese/unoise_id_fix

Force weak_id to be a reasonable value when cluster_unoise (0.9)
torognes · Feb 28, 2019 · da11f73 · da11f73
2 parents 97c8924 + b1b7b64
commit da11f73
Showing 1 changed file with 6 additions and 3 deletions.
diff --git a/src/vsearch.cc b/src/vsearch.cc
@@ -2048,8 +2048,11 @@ void args_init(int argc, char **argv)
   if (commands > 1)
     fatal("More than one command specified");
 
-  if (opt_weak_id > opt_id)
-    opt_weak_id = opt_id;
+  if (opt_cluster_unoise)
+    opt_weak_id = 0.90;
+  else
+    if (opt_weak_id > opt_id)
+      opt_weak_id = opt_id;
 
   if (opt_maxrejects == -1)
     {
@@ -2871,7 +2874,7 @@ void cmd_cluster()
   if (!opt_cluster_unoise)
     if ((opt_id < 0.0) || (opt_id > 1.0))
       fatal("Identity between 0.0 and 1.0 must be specified with --id");
-
+ 
   if (opt_cluster_fast)
     cluster_fast(cmdline, progheader);
   else if (opt_cluster_smallmem)