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add nb_conda_kernels to base env
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resolves #10
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aryarm authored Dec 11, 2022
1 parent c649a37 commit dc7b545
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -49,7 +49,7 @@ RUN wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5
chmod 755 /opt/FastQC/fastqc && \
rm -rf /tmp/fastqc_*

RUN mamba install -c conda-forge bash_kernel
RUN mamba install -c conda-forge bash_kernel nb_conda_kernels

# create scanpy_2021 conda environment with required python packages
COPY scanpy_2021.yaml /tmp
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