statsmodels + jupyterlab bump #1340
Workflow file for this run
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| name: AUTO Build and Test | |
| env: | |
| DOCKER_CLIENT_TIMEOUT: "300" | |
| COMPOSE_HTTP_TIMEOUT: "300" | |
| on: | |
| push: | |
| paths: | |
| - "images/**" | |
| - "model/**" | |
| - "scripts/**" | |
| - "dodo.py" | |
| - ".github/workflows/main.yml" | |
| pull_request: | |
| branches: [ main ] | |
| paths: | |
| - "images/**" | |
| - "model/**" | |
| - "scripts/**" | |
| - "dodo.py" | |
| - ".github/workflows/main.yml" | |
| workflow_dispatch: | |
| jobs: | |
| start-runner: | |
| name: Start self-hosted EC2 runner | |
| runs-on: ubuntu-latest | |
| outputs: | |
| label: ${{ steps.start-ec2-runner.outputs.label }} | |
| ec2-instance-id: ${{ steps.start-ec2-runner.outputs.ec2-instance-id }} | |
| steps: | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: us-west-2 | |
| - name: Start EC2 runner | |
| id: start-ec2-runner | |
| uses: machulav/ec2-github-runner@v2 | |
| with: | |
| mode: start | |
| github-token: ${{ secrets.GH_PERSONAL_ACCESS_TOKEN }} | |
| ec2-image-id: ami-079a0c9425d45e778 | |
| ec2-instance-type: t3.2xlarge | |
| subnet-id: subnet-0c4a81ef57cf2ebe3 | |
| security-group-id: sg-01cb8c0cb0de3ba00 | |
| docker-pipeline: | |
| needs: start-runner # required to start the main job when the runner is ready | |
| runs-on: ${{ needs.start-runner.outputs.label }} | |
| if: > | |
| !contains(github.event.head_commit.message , 'skip ci') && | |
| !contains(github.event.pull_request.title, 'skip ci') | |
| steps: | |
| - name: Checkout after Free Space | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Docker/ENV cleanup Cleanup | |
| run: | | |
| docker image prune -a -f | |
| docker container prune -f | |
| sudo rm -rf /usr/local/lib/android | |
| sudo rm -rf /usr/share/dotnet | |
| sudo rm -rf /opt/ghc | |
| sudo rm -rf "/usr/local/share/boost" | |
| sudo rm -rf "$AGENT_TOOLSDIRECTORY" | |
| - name: Install pip dependencies | |
| run: | | |
| sudo dnf -y install python-pip | |
| sudo dnf remove python3-requests -y | |
| python3 -m pip install -r scripts/requirements.txt | |
| - name: Install selenium dependecies for r studio | |
| run: | | |
| chmod +x ./scripts/selenium_setup.sh | |
| ./scripts/selenium_setup.sh | |
| - name: Install pydoit fixed | |
| run: | | |
| git clone https://github.com/davidzyx/doit | |
| pip install ./doit | |
| rm -rf ./doit | |
| mkdir -p logs manifests | |
| touch logs/run.log | |
| - name: Set Python-specific environment variables | |
| run: | | |
| echo "PYTHONPATH=$(pwd)" >> $GITHUB_ENV | |
| echo "PYTHONUNBUFFERED=TRUE" >> $GITHUB_ENV | |
| - name: Setup artifacts | |
| env: | |
| DOCKERHUB_TOKEN: ${{ secrets.DOCKERHUB_TOKEN }} | |
| DOCKERHUB_USER: ${{ secrets.DOCKERHUB_USER }} | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_USER: ${{ github.actor }} | |
| run: | | |
| doit prep | |
| mkdir -p logs | |
| - name: Clone Wiki | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: ${{github.repository}}.wiki | |
| path: wiki | |
| - name: Build stack | |
| env: | |
| DOCKERHUB_TOKEN: ${{ secrets.DOCKERHUB_TOKEN }} | |
| DOCKERHUB_USER: ${{ secrets.DOCKERHUB_USER }} | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| GITHUB_USER: ${{ github.actor }} | |
| GRPC_CERT: ${{ secrets.GRPC_CERT }} | |
| PREPUSH_IMAGES: '["ghcr.io/ucsd-ets/scipy-ml-notebook"]' | |
| run: | | |
| python3 scripts/main.py | |
| - name: Check Free Space | |
| run: | | |
| echo "Free space:" | |
| df -h | |
| - name: Push Wiki to GitHub | |
| if: > | |
| !contains(github.base_ref , 'test') && | |
| !contains(github.base_ref , 'dev') && | |
| !contains(github.event.head_commit.message , 'skip push') && | |
| ( | |
| github.ref == 'refs/heads/main' | |
| ) | |
| uses: stefanzweifel/git-auto-commit-action@v4 | |
| with: | |
| commit_message: "[ci skip] Automated publish for ${{github.sha}}" | |
| repository: wiki/ | |
| - name: Archive artifacts and logs | |
| if: ${{ always() }} | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: build-artifacts | |
| path: | | |
| artifacts | |
| logs | |
| manifests | |
| stop-runner: | |
| name: Stop self-hosted EC2 runner | |
| needs: | |
| - start-runner # required to get output from the start-runner job | |
| - docker-pipeline # required to wait when the main job is done | |
| runs-on: ubuntu-latest | |
| if: ${{ always() }} # required to stop the runner even if the error happened in the previous jobs | |
| steps: | |
| - name: Configure AWS credentials | |
| uses: aws-actions/configure-aws-credentials@v1 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: us-west-2 | |
| - name: Stop EC2 runner | |
| uses: machulav/ec2-github-runner@v2 | |
| with: | |
| mode: stop | |
| github-token: ${{ secrets.GH_PERSONAL_ACCESS_TOKEN }} | |
| label: ${{ needs.start-runner.outputs.label }} | |
| ec2-instance-id: ${{ needs.start-runner.outputs.ec2-instance-id }} |