add workflow

.github/workflows/pre-commit.yml

@@ -0,0 +1,14 @@
+name: pre-commit
+
+on:
+  pull_request:
+  push:
+    branches: [main]
+
+jobs:
+  pre-commit:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - uses: actions/setup-python@v3
+    - uses: pre-commit/[email protected]

.pre-commit-config.yaml

@@ -1,36 +1,41 @@
-default_language_version:
-  python: python3.9
-
-default_stages: [commit, push]
+ci:
+  autoupdate_schedule: monthly
 
+# https://pre-commit.com/
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v2.5.0
+    rev: v5.0.0
     hooks:
-      - id: check-yaml
+      - id: trailing-whitespace
       - id: end-of-file-fixer
-        exclude: LICENSE
-
-  - repo: local
+      - id: check-docstring-first
+  - repo: https://github.com/psf/black
+    rev: 24.10.0
     hooks:
-      - id: pyupgrade
-        name: pyupgrade
-        entry: poetry run pyupgrade --py39-plus
-        types: [python]
-        language: system
-
-  - repo: local
+      - id: black
+  - repo: https://github.com/keewis/blackdoc
+    rev: v0.3.9
     hooks:
-      - id: isort
-        name: isort
-        entry: poetry run isort --settings-path pyproject.toml
-        types: [python]
-        language: system
-
-  - repo: local
+      - id: blackdoc
+        additional_dependencies: ["black==24.10.0"]
+      - id: blackdoc-autoupdate-black
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.7.1
     hooks:
-      - id: black
-        name: black
-        entry: poetry run black --config pyproject.toml
-        types: [python]
-        language: system
+      - id: ruff
+        args: [--fix]
+  - repo: https://github.com/kynan/nbstripout
+    rev: 0.7.1
+    hooks:
+      - id: nbstripout
+        args: [--extra-keys=metadata.kernelspec metadata.language_info.version]
+  - repo: https://github.com/rbubley/mirrors-prettier
+    rev: v3.3.3
+    hooks:
+      - id: prettier
+  - repo: https://github.com/ComPWA/taplo-pre-commit
+    rev: v0.9.3
+    hooks:
+      - id: taplo-format
+      - id: taplo-lint
+        args: [--no-schema]

tests_metiers/test_new_caledonia.py

@@ -1,20 +1,21 @@
-
 import datetime
 import shapely
 import geopandas as gpd
 import cdsodatacli
 import logging
 import time
+
 if __name__ == '__main__':
     t0 = time.time()
     import argparse
+
     parser = argparse.ArgumentParser(description="testsnewrelease")
     parser.add_argument("--verbose", action="store_true", default=False)
     parser.add_argument("--cache", action="store_true", default=None,
                         help='cache directory to store answer from CDS as json files [default is None]')
-    parser.add_argument('--mode',choices=['seq','multi'],
+    parser.add_argument('--mode', choices=['seq', 'multi'],
                         help='mode of query seq-> sequential multi-> multithread [default is sequential]',
-                        default='seq',required=False)
+                        default='seq', required=False)
     args = parser.parse_args()
     fmt = "%(asctime)s %(levelname)s %(filename)s(%(lineno)d) %(message)s"
     if args.verbose:
@@ -26,14 +27,14 @@
             level=logging.INFO, format=fmt, datefmt="%d/%m/%Y %H:%M:%S", force=True
         )
 
-    sta = datetime.datetime(2014,4,6)
-    sta = datetime.datetime(2022,1,6)
+    sta = datetime.datetime(2014, 4, 6)
+    sta = datetime.datetime(2022, 1, 6)
     sta = datetime.datetime.today() - datetime.timedelta(days=365)
-    sta = datetime.datetime(2023,1,1)
+    sta = datetime.datetime(2023, 1, 1)
     # sta = datetime.datetime.today() - datetime.timedelta(days=7)
     sto = datetime.datetime.today()
-    sto = datetime.datetime(2023,11,13)
-    logging.info('from %s to %s',sta,sto)
+    sto = datetime.datetime(2023, 11, 13)
+    logging.info('from %s to %s', sta, sto)
     # 17° 52′ 46″ S 162° 36′ 31″ E
     # 22° 56′ 36″ S 168° 12′ 02″ E
     latmin = -17.87944444
@@ -43,21 +44,21 @@
     # poly = shapely.wkt.loads("POLYGON ((162 -19, 169 -19, 169 -23, 162 -23, 162 -19))")
     # cache_dir = '/home1/scratch/agrouaze/cache_cdsodata/'
     # cache_dir = None
-    poly = shapely.geometry.Polygon([(lonmin,latmin),(lonmax,latmin),(lonmax,latmax),(lonmin,latmax),(lonmin,latmin)])
+    poly = shapely.geometry.Polygon(
+        [(lonmin, latmin), (lonmax, latmin), (lonmax, latmax), (lonmin, latmax), (lonmin, latmin)])
     gdf = gpd.GeoDataFrame({
-            "start_datetime" : [ sta ],
-            "end_datetime"   : [ sto],
-            "geometry"   : [ poly],
-            "collection"  : [ "SENTINEL-1"],
-            "name"        : [ "1SDV"],
-            "sensormode"  : [ 'IW'],
-            "producttype" : [ 'SLC'],
-            "Attributes"  : [ None],
-        })
-    logging.info('cache_dir : %s',args.cache)
+        "start_datetime": [sta],
+        "end_datetime": [sto],
+        "geometry": [poly],
+        "collection": ["SENTINEL-1"],
+        "name": ["1SDV"],
+        "sensormode": ['IW'],
+        "producttype": ['SLC'],
+        "Attributes": [None],
+    })
+    logging.info('cache_dir : %s', args.cache)
     # mode = 'multi'
-    collected_data_norm = cdsodatacli.query.fetch_data(gdf, min_sea_percent=30,cache_dir=args.cache,mode=args.mode)
+    collected_data_norm = cdsodatacli.query.fetch_data(gdf, min_sea_percent=30, cache_dir=args.cache, mode=args.mode)
     logging.info("%s", collected_data_norm)
-    elapsed = time.time()-t0
-    logging.info('over total time: %1.1f sec',elapsed)
-
+    elapsed = time.time() - t0
+    logging.info('over total time: %1.1f sec', elapsed)