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BIN LI committed Mar 27, 2020
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# Second-harmonic Generation Collagen Image Synthesis from Hematoxylin and Eosin Image Using Image-to-image Translation Neural Network
Program for a complete H&E-SHG synthesizing workflow
Program for a complete H&E-SHG synthesizing workflow
Paper accepted at https://www.nature.com/commsbio/
Will soon be updated

|Input H&E| Synthesized Collagen Image |
|----------|--------|
|<img src="https://github.com/uw-loci/he_shg_synth_workflow/blob/master/thumbnails/he.jpg" width="320">|<img src="https://github.com/uw-loci/he_shg_synth_workflow/blob/master/thumbnails/shg.jpg" width="320">|

## Required packages
Install required packages in a virtual environment, commands for anaconda/miniconda are listed
Install required packages in a virtual environment, commands for anaconda/miniconda(https://www.anaconda.com/distribution/) are listed
* python==3.6.x
```
conda create --name [NAME_ENV] python=3.6
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