A genome variant calling tool (wrapper) written in python using textual lib
Note
🚧 Under early development 🚧
pip install varcallNote
It is recommended to run varcall in a conda environment
To install conda refer miniconda
varcall requires variant calling tools to run, you can download them by:
conda create -n varcall -y
conda install -c bioconda fastqc multiqc bwa samtools bcftools
varcall is distributed under the terms of the MIT license.