Template Vivarium Project

Visit the Vivarium Core documentation to learn how to use the core Vivarium engine to create computational biology models. Check out the getting started guide of the documentation.

Using this Template

This repository contains a skeleton project you can build on to create your own models. Go to the github page and select use this template.

Getting Started

Please ensure that you make adjustments to the following files with your own information:

• setup.py: Update this file with all of your PyPI package/module information.
• requirements.txt: Add any of your simulator-specific dependencies here, for example: tellurium.
• pytest.ini: It is crucial that you update the testpaths field in this file once you update the primary package folder, which is ./template in this current template format.

What follows is a template README.md.

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Project Name

Introduction to your project.

Installation

Explain how users can get up and running.