Merge pull request MunskyGroup#4 from MunskyGroup/implement-testing-a…

…ction

Implement testing action

.github/workflows/setup-and-run-tests.yml

@@ -0,0 +1,30 @@
+name: Run MATLAB Tests on GitHub-Hosted Runner
+on: [push]
+jobs:
+  my-job:
+    name: Run MATLAB Tests and Generate Artifacts
+    runs-on: ubuntu-latest
+    continue-on-error: true
+    strategy:
+      matrix:
+        release: [R2023a
+        #, R2023b TODO: There is currently a bug affecting one test on R2023b
+        ]  
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v3
+      - name: Set up MATLAB
+        uses: matlab-actions/setup-matlab@v1
+        with:
+          release: ${{ matrix.release }}
+      - name: Add paths
+        uses: matlab-actions/run-command@v1
+        with:
+          command: addpath(genpath("src"))
+      - name: Run MATLAB Tests
+        uses: matlab-actions/[email protected]    
+        with:
+          select-by-folder: tests
+          test-results-junit: test-results/results.xml
+          code-coverage-cobertura: code-coverage/coverage.xml
+          source-folder: src

README.md

@@ -49,7 +49,8 @@ The SSIT includes command line tools and a graphical user interface to:
 
 # Dependencies
 For all basic functionalities:
-- MATLAB R2021b or later.
+- MATLAB R2023a
+ - Note that most, but not all, functionalities are also working in R2023b; we therefore encourage using R2023a for the time being.
 - Symbolic Computing Toolbox.
 - Image Processing Toolbox
 - Global Optimization Toolbox (for model fitting only)

tests/SBML_test_cases/00004/00004-results.csv → archived_tests/SBML_test_cases/00004/00004-results.csv

@@ -1,52 +1,52 @@
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tests/SBML_test_cases/00010/00010-results.csv → archived_tests/SBML_test_cases/00010/00010-results.csv

@@ -1,52 +1,52 @@
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tests/SBML_test_cases/00014/00014-results.csv → archived_tests/SBML_test_cases/00014/00014-results.csv

@@ -1,52 +1,52 @@
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