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add dataset BjorkJR_2024 #303

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resphera-jrwhite opened this issue Feb 26, 2024 · 0 comments
Open

add dataset BjorkJR_2024 #303

resphera-jrwhite opened this issue Feb 26, 2024 · 0 comments
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@schifferl
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Describe the bug
Missing data associated with Bjork et al. 2024 Nature Medicine "Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma"

To Reproduce
curatedMetagenomicData('.+')
produces a list of files from studies available, but Bjork et al. 2024 data is not present. It is claimed in the Nature Medicine paper that the data are located in this package.

Expected behavior
I am expecting a set of Metaphlan4 and HUMAnN3 files covering samples from the Bjork study.

Additional context
n/a
@schifferl schifferl changed the title Longitudinal gut microbiome changes in immune checkpoint blockade-treated advanced melanoma add dataset BjorkJR_2024 Feb 28, 2024
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@schifferl @resphera-jrwhite