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TranscriptID_GeneName_Extract
TranscriptID_GeneName_Extract PublicPulls the transcript ID and gene names from multi-fasta file headers. The outputs are used by a separate script to organize data into gene named directories containing all associated transcripts
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SNP_Data_Extraction_Tool
SNP_Data_Extraction_Tool PublicPulling data from the ScanFold-Scan log.out file for all 241 windows that contain an SNP.
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siRNA_Scoring
siRNA_Scoring PublicThis script parses through multiple ScanFold input and output files to generate per nucleotide and average data for a 19nt tiled window
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ScanFold_Oligo_Metric
ScanFold_Oligo_Metric PublicPython script to parse through ScanFold output data in tiled 18nt windows to determine metrics associated with potential ASOs.
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