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release: bump to version v0.11.1
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@tshauck
tshauck committed Mar 4, 2024
1 parent 67fe23d commit 01b7199
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16 changes: 16 additions & 0 deletions CHANGELOG.md
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@@ -1,5 +1,21 @@
# CHANGELOG

## v0.11.1 (2024-03-03)

### Feat

- support s3 region files (#420)
- update (#418)
- working with region file (#415)

### Fix

- fix tests (#421)

### Refactor

- cleanup for point release (#422)

## v0.11.0 (2024-02-28)

### Feat
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38 changes: 19 additions & 19 deletions Cargo.lock
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2 changes: 1 addition & 1 deletion Cargo.toml
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Expand Up @@ -4,7 +4,7 @@ homepage = "https://www.wheretrue.dev/docs/exon/"
license = "Apache-2.0"
readme = "README.md"
repository = "https://github.com/wheretrue/exon"
version = "0.11.0"
version = "0.11.1"

[workspace]
members = [
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3 changes: 1 addition & 2 deletions cz.json
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Expand Up @@ -22,9 +22,8 @@
"exon/exon-test/Cargo.toml",
"exon/exon-vcf/Cargo.toml",
"exon/exon-cli/Cargo.toml",
"python/Cargo.toml",
".github/workflows/build-cli-image.yml"
],
"update_changelog_on_bump": true
}
}
}
4 changes: 2 additions & 2 deletions exon/exon-bam/Cargo.toml
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Expand Up @@ -10,8 +10,8 @@ version = { workspace = true }

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-sam = { path = "../exon-sam", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
exon-sam = { path = "../exon-sam", version = "0.11.1" }
futures = { workspace = true }
itertools = "0.12.1"
noodles = { workspace = true, features = [
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4 changes: 2 additions & 2 deletions exon/exon-bcf/Cargo.toml
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Expand Up @@ -12,8 +12,8 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-vcf = { path = "../exon-vcf", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
exon-vcf = { path = "../exon-vcf", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["core", "async", "bcf", "bgzf"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-bed/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["bed", "core"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-cli/Cargo.toml
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Expand Up @@ -13,7 +13,7 @@ version.workspace = true
clap = { version = "4", features = ["derive", "cargo"] }
datafusion = { workspace = true }
datafusion-cli = { version = "36" }
exon = { path = "../exon-core", version = "0.11.0" }
exon = { path = "../exon-core", version = "0.11.1" }
tokio = { workspace = true }
tracing = "0.1.40"
tracing-subscriber = { version = "0.3.18", features = ["env-filter"] }
28 changes: 14 additions & 14 deletions exon/exon-core/Cargo.toml
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Expand Up @@ -14,20 +14,20 @@ arrow = { workspace = true }
async-trait = { workspace = true }
bytes = "1.5.0"
datafusion = { workspace = true }
exon-bam = { path = "../exon-bam", version = "0.11.0" }
exon-bcf = { path = "../exon-bcf", version = "0.11.0" }
exon-bed = { path = "../exon-bed", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-fasta = { path = "../exon-fasta", version = "0.11.0" }
exon-fastq = { path = "../exon-fastq", version = "0.11.0" }
exon-fcs = { path = "../exon-fcs", version = "0.11.0", optional = true }
exon-genbank = { path = "../exon-genbank", version = "0.11.0", optional = true }
exon-gff = { path = "../exon-gff", version = "0.11.0" }
exon-gtf = { path = "../exon-gtf", version = "0.11.0" }
exon-io = { path = "../exon-io", version = "0.11.0" }
exon-mzml = { path = "../exon-mzml", version = "0.11.0", optional = true }
exon-sam = { path = "../exon-sam", version = "0.11.0" }
exon-vcf = { path = "../exon-vcf", version = "0.11.0" }
exon-bam = { path = "../exon-bam", version = "0.11.1" }
exon-bcf = { path = "../exon-bcf", version = "0.11.1" }
exon-bed = { path = "../exon-bed", version = "0.11.1" }
exon-common = { path = "../exon-common", version = "0.11.1" }
exon-fasta = { path = "../exon-fasta", version = "0.11.1" }
exon-fastq = { path = "../exon-fastq", version = "0.11.1" }
exon-fcs = { path = "../exon-fcs", version = "0.11.1", optional = true }
exon-genbank = { path = "../exon-genbank", version = "0.11.1", optional = true }
exon-gff = { path = "../exon-gff", version = "0.11.1" }
exon-gtf = { path = "../exon-gtf", version = "0.11.1" }
exon-io = { path = "../exon-io", version = "0.11.1" }
exon-mzml = { path = "../exon-mzml", version = "0.11.1", optional = true }
exon-sam = { path = "../exon-sam", version = "0.11.1" }
exon-vcf = { path = "../exon-vcf", version = "0.11.1" }
futures = { workspace = true }
itertools = "0.12.1"
noodles = { workspace = true, features = [
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2 changes: 1 addition & 1 deletion exon/exon-fasta/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["core", "async", "fasta"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-fastq/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["async", "fastq"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-fcs/Cargo.toml
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Expand Up @@ -13,7 +13,7 @@ version.workspace = true
[dependencies]
arrow = { workspace = true }
byteorder = { version = "1.5.0" }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
object_store = { workspace = true }
tokio = { workspace = true, features = ["fs"] }
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2 changes: 1 addition & 1 deletion exon/exon-genbank/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
gb-io = { version = "0.7.1" }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-gff/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["gff", "core"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-gtf/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["gtf"] }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-mzml/Cargo.toml
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Expand Up @@ -14,7 +14,7 @@ version.workspace = true
arrow = { workspace = true }
base64 = { version = "0.21" }
byteorder = { version = "1.5.0" }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
flate2 = { version = "1.0.28" }
futures = { workspace = true }
object_store = { workspace = true }
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2 changes: 1 addition & 1 deletion exon/exon-sam/Cargo.toml
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Expand Up @@ -10,7 +10,7 @@ version = { workspace = true }

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
itertools = "0.12.1"
noodles = { workspace = true, features = [
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2 changes: 1 addition & 1 deletion exon/exon-vcf/Cargo.toml
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Expand Up @@ -12,7 +12,7 @@ version.workspace = true

[dependencies]
arrow = { workspace = true }
exon-common = { path = "../exon-common", version = "0.11.0" }
exon-common = { path = "../exon-common", version = "0.11.1" }
futures = { workspace = true }
noodles = { workspace = true, features = ["core", "async", "vcf", "bgzf"] }
noodles-bgzf = { version = "0.26.0", features = ["libdeflate"] }
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