A repository containing metabolites and lipids from WormJam, in silico predictions and curated from literature
Caenorhabditis elegans (C. elegans) is an important model organism in biomedical research. Despite its importance no metabolome and/or lipidome exits. This repository is closing this gap by delivering metabolites curated from literature, predicted to be present or generated in silico.
This repository contains different folder representing the different levels of curation.
This folder contains metabolites curated from published C. elegans metabolomics and lipidomics studies. For each publication one file is provided with metabolites and names normalized towards a standard name (mostly ChEBI).
The folder literature_combined contains a list of all unique metabolites across the entire curated literature.
This folder contains predicted metabolites, e.g. based on detected and identified metabolites, using variable scafolds such as acyl chains of different length.