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DOC: build amplitude with K-matrix dynamics#278

Merged

redeboer merged 92 commits intomainComPWA/compwa.github.io:mainfrom kmatrixComPWA/compwa.github.io:kmatrixCopy head branch name to clipboard

May 24, 2024

+4,343-5

Conversation Commits92 (92)Checks Files changed

Commits

Commits on May 23, 2024

DOC: import notebooks from https://github.com/ComPWA/K-matrix-research

Lena Poepping
authored and
redeboer
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
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MAINT: update Python version in kernel
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MAINT: address Ruff linting issues
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MAINT: move import statements to top
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DOC: integrate notebooks into TR infrastructure
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FIX: import create_dynamics_symbol() from K-matrix-research
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FIX: import additional nstar definitions
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MAINT: rename additional-definitions.yml
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DOC: fix cspell errors
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FIX: install jax and phasespace
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FIX: make notebooks runnable
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DOC: improve fake Nstar names
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ENH: use JAX as backend
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BEHAVIOR: generate data with F-vector instead of BW
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DOC: remove N* tables
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MAINT: remove slideshow and editable notebook metadata
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DOC: improve notebook rendering on website
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FIX: do not project to imag before Argand
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ENH: render plots as SVG
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MAINT: remove redundant cspell ignore
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MAINT: clean up additional definitions file
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MAINT: rename epsilon to ε
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FIX: get resonances from double loop
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FIX: filter with \\beta instead of Dummy
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ENH: make coupling_pattern argument oblicatory
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BEHAVIOR: define ε offset outside sqrt
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ENH: switch Argand and phase plots
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MAINT: bundle plotting code in functions
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ENH: increase phase space size to 500,000 for plotting
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DOC: improve TR description cards
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DOC: add TR tags to K-matrix reports
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DOC: add TR tag dynamics to reports
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DX: order parameters by quantum number and mass
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BREAK: define fake N* inline with Python
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BREAK: rename TR-030 to TR-033
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BREAK: rename TR-031 to TR-030
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BREAK: rename TR-033 to TR-031
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MAINT: plot sub-intensity histograms with loop
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ENH: plot histograms with JAX
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FIX: correctly color resonance mass lines
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ENH: render x-axis in phase plot
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MAINT: remove redundant resonances definition
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DOC: improve HTML rendering of TR-030 and TR-031
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MAINT: remove redundant dynamics functions TR-031
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ENH: set use_cse=True
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ENH: improve fit result printing
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ENH: use same masses and betas as starting paramters
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ENH: print simple fit results, not full iminuit output
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ENH: print parameter deviation
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ENH: print parameter deviation
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ENH: improve legend position in comparison plot
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ENH: use color cycler for resonance indicators
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DOC: hide compare_model() definition cell
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FIX: remove redundant resonances and reaction_info definitions
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Commits on May 24, 2024

ENH: remove PARTICLE_DB global
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MAINT(TR-032): move decay definition to top
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MAINT(TR-032): define DynamicsSymbolBuilder
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MAINT(TR-032): split DECAYS cell and move to relevant locations
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ENH(TR-032): collect DECAYS with function
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DOC(TR-032): improve rendering Phase space factor section
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MAINT(TR-032): remove redundant Breit-Wigner definition
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ENH(TR-032): remove redundant decay product mass definitions
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MAINT(TR-032): make variable naming in builders
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ENH(TR-032): use itertools.product in formulate_k_matrix()
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DOC(TR-032): improve section organization Amplitude model formulation
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MAINT: remove ChannelWidth definition
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MAINT: simplify evaluate() of ChewMandelstam
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ENH: simplify LaTeX name of fake N* resonances
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ENH: render particle name with unicode subscript
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MAINT: move expression unfolding to numerical function generation
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ENH: define estimator sum with comprehension
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ENH: remove redundant display statements
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ENH(TR-032): compute histograms with JAX
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MAINT(TR-032): equalize notebook style with TR-031
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ENH: improve sub-section orderin in fit section
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ENH(TR-032): remove CSVSummary callback
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DX(TR-032): assert if fit succeeded
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MAINT(TR-032): use list comprehensions
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FIX(TR-032): remove redundant DataFrame call
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FIX(TR-032): remove m_0 etc from default parameters
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MAINT(TR-032): remove redundant DYNAMICS_FUNCS_FVECTOR
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DOC(TR-032): improve section organization "Generate data"
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MAINT(TR-032): rename epsilon to ε
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ENH(TR-032): set original parameters just before data generation
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DOC(TR-032): indicate thresholds in toy model parameter plot
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ENH(TR-032): improve coupling values for clearer Flatté effect
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ENH(TR-032): combine parameter comparison plot in one figure
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DOC: improve HTML rendering
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MAINT: rename new_parameters to toy_parameters
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MAINT: update notebook kernels of affected notebooks
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FIX: do not fit beta in coupled fit
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