Code

Improve user messages#77

Code

Merged

thomasmfish merged 8 commits intomainDiamondLightSource/PySIMRecon:mainfrom improve-exception-loggingDiamondLightSource/PySIMRecon:improve-exception-loggingCopy head branch name to clipboardOct 17, 2024

+159-34

Commits

Commits on Oct 17, 2024

• ProcessingInfo: add status property

  

  Thomas Fish

  committed
  fb7eab7

  Copy full SHA for fb7eab7

• run_reconstructions: use ProcessingInfo.status to check whether channels have processed

  

  Thomas Fish

  committed
  f5c49ba

  Copy full SHA for f5c49ba

• Improve exception catching

  

  Thomas Fish

  committed
  d22d3f5

  Copy full SHA for d22d3f5

• generate_memmaps_from_tiffs: yields tiff memmaps while logging and raising exceptions

  

  Thomas Fish

  committed
  b6c46fd

  Copy full SHA for b6c46fd

• get_combined_array_from_tiffs: use generate_memmaps_from_tiffs

  

  Thomas Fish

  committed
  c283e01

  Copy full SHA for c283e01

• write_tiff: add allow_empty_channels argument that defaults to False, raising a UndefinedValueError if a channel is empty

  

  Thomas Fish

  committed
  bf1376a

  Copy full SHA for bf1376a

• Wavelengths.__str__: include emission_nm_int attribute to simplify logging

  

  Thomas Fish

  committed
  fe6e4a2

  Copy full SHA for fe6e4a2

• reconstruct_from_processing_info: raise ReconstructionError if rec_array is all NaNs

  

  Thomas Fish

  committed
  eddd9dd

  Copy full SHA for eddd9dd