V1.2.0.20240201 #111
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: heatcluster test | |
| on: [pull_request, workflow_dispatch] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v4 | |
| - name: install dependencies | |
| run: pip3 install pandas numpy pathlib seaborn seaborn_polars polars pyarrow matplotlib scipy | |
| - name: test (tab-delimited) | |
| run: python3 heatcluster.py -i test/small_matrix.csv | |
| - name: test1 (comma-delimited) | |
| run: python3 heatcluster.py -i test/snp-dists.txt -o test1 | |
| - name: test2 (empty first row/col cell) | |
| run: python3 heatcluster.py -i test/blank.txt -o test2 -t png | |
| - name: test3 (melted - failure) | |
| run: python3 heatcluster.py -i test/melted.txt -o test3 | |
| - name: test4 (small matrix) | |
| run: python3 heatcluster.py -i test/small_matrix.csv -o test4 | |
| - name: test5 (medium matrix) | |
| run: python3 heatcluster.py -i test/med_matrix.txt -o test5 | |
| - name: test6 (large matrix) | |
| run: python3 heatcluster.py -i test/large_matrix.csv -o test6 | |
| - name: test7 (help) | |
| run: python3 heatcluster.py -h | |
| - name: test8 (version) | |
| run: python3 heatcluster.py -v | |
| - name: tree | |
| run: tree |