debug CI #465
Workflow file for this run
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| name: Test and build | |
| on: [push, pull_request, release] | |
| jobs: | |
| qa: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - uses: pre-commit/[email protected] | |
| test: | |
| needs: qa | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-latest, macos-latest, windows-latest ] | |
| python-version: [ "3.9" , "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| lfs: true | |
| - if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.9 | |
| run: | | |
| git lfs pull | |
| git checkout pyrealm_build_data/*.nc | |
| - uses: stefanzweifel/git-auto-commit-action@v5 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Poetry | |
| uses: abatilo/[email protected] | |
| with: | |
| poetry-version: 1.2.2 | |
| - name: Install dependencies | |
| run: poetry install | |
| # - name: Run tests | |
| # run: poetry run pytest -m "not profiling" --cov-report xml | |
| - name: Run profiling | |
| id: profiling | |
| if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.9 # && github.ref == 'refs/heads/main' | |
| run: | | |
| git lfs pull | |
| poetry run pytest -m "profiling" --profile-svg | |
| mv prof/combined.prof profiling/profiling.prof | |
| # mv prof/combined.svg profiling/profiling.svg | |
| poetry run python profiling/report.py | |
| - name: Remove LFS objects | |
| run: git checkout pyrealm_build_data/*.nc | |
| - name: Generate report | |
| uses: stefanzweifel/git-auto-commit-action@v5 | |
| if: steps.profiling.outcome == 'success' | |
| with: | |
| file_pattern: 'profiling/*' | |
| commit_message: Auto-generated report | |
| skip_fetch: true | |
| skip_checkout: true | |
| - name: Upload coverage reports to Codecov | |
| if: success() && (matrix.os == 'ubuntu-latest' && matrix.python-version == 3.9) | |
| uses: codecov/codecov-action@v3 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| docs_build: | |
| needs: qa | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.11" | |
| - name: Install Poetry | |
| uses: abatilo/[email protected] | |
| with: | |
| poetry-version: 1.2.2 | |
| - name: Install dependencies | |
| run: poetry install | |
| - name: Set ipython kernel | |
| run: poetry run python -m ipykernel install --user --name=pyrealm_python3 | |
| - name: Build docs using sphinx | |
| run: | | |
| cd docs | |
| poetry run sphinx-build -W --keep-going source build | |
| - name: Archive built docs for error checking on failure | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: built-docs | |
| path: docs/build | |
| retention-days: 2 |