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BAMF - NNUnet Lung and Nodules#78

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jithenece wants to merge 16 commits intoMHubAI:mainMHubAI/models:mainfrom bamf-health:bamf_nnunet_ct_lungbamf-health/mhub-models:bamf_nnunet_ct_lungCopy head branch name to clipboard

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Commits on Apr 30, 2024

• define flow using mhub modules

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  abeacbd

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Commits on May 2, 2024

• combine lung, nodules and tumor

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• draft meta info

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Commits on May 6, 2024

• combine lung and nodule segmentation

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• avoid same file override with nnunet run

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Commits on May 7, 2024

• remove custom dseg meta

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  d32956b

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• use segdb code

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• execute NNUnet using single module

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Commits on May 20, 2024

• remove CustomNNUnetRunner.py

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Commits on May 22, 2024

• use FDG_AVID_TUMOR label

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  92ced5b

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• remove customNNUnet Runner

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• Merge branch 'MHubAI:main' into bamf_nnunet_ct_lung

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Commits on Jun 4, 2024

• set nnunet version

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Commits on Jul 2, 2024

• update meta info

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Commits on Jul 25, 2024

• fix review comments

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Commits on Jul 29, 2024

• change directory name to match output file name

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