GitHub - Max-Highsmith/MolecularModelingProject: Template target method

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 25 Commits
.gitignore		.gitignore
1fdx.B99990001.pdb		1fdx.B99990001.pdb
1u19.fasta		1u19.fasta
2b7h.pdb		2b7h.pdb
2b7h.png		2b7h.png
5fd1.pdb		5fd1.pdb
5fs4.pdb		5fs4.pdb
5fs4.png		5fs4.png
Descent.mov		Descent.mov
Descent.mp4		Descent.mp4
T0859.fasta		T0859.fasta
align-multiple.ali		align-multiple.ali
alignment.ali		alignment.ali
carbonAlphaExtractor.py		carbonAlphaExtractor.py
featureExtractor.py		featureExtractor.py
main.py		main.py
molecularProject.py		molecularProject.py
new_out.pdb		new_out.pdb
new_out.png		new_out.png
objectiveFunctionAndGradient.py		objectiveFunctionAndGradient.py
readme.txt		readme.txt
tbm2.py		tbm2.py
tbm2_log.py		tbm2_log.py
tbm3_log.py		tbm3_log.py

Repository files navigation

target:  T0859
Template: 5fs4.pdb
carbonAlphaExtractor:  determines carbon alpha lengths of pdb file
molecularProject: blast call of fasta file to determine PIR