Merge pull request #33 from NTD-Modelling-Consortium/reduceCoverage #127
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| name: clang-format, build and run | |
| on: [push] | |
| jobs: | |
| format-and-build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Install clang-format-18 | |
| run: | | |
| sudo apt update | |
| sudo apt install pipx | |
| pipx ensurepath | |
| pipx install clang-format | |
| - name: Run clang-format h, cpp and hpp files | |
| run: find . -iname '*.h' -o -iname '*.cpp' -o -iname '*.hpp' | xargs clang-format --dry-run -Werror | |
| - name: Build | |
| run: | | |
| # install catch2 | |
| git clone https://github.com/catchorg/Catch2.git | |
| cd Catch2 | |
| cmake -B build -S . -DBUILD_TESTING=OFF | |
| sudo cmake --build build/ --target install | |
| cd .. | |
| mkdir build && cd build/ | |
| cmake .. | |
| cmake --build . | |
| - name: Run model | |
| run: | | |
| mkdir sample_results | |
| build/src/transfil\_N -s sample_inputs/scenario.xml -n sample_inputs/population_distribution.csv -p sample_inputs/random_parameters.txt -g sample_inputs/random_seeds.txt -r 2 -t 1 -o sample_results | |
| - name: Run tests | |
| run: | | |
| ctest --test-dir build/tests --output-on-failure |