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Update src/pixelator/pixeldataset/utils.py
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Co-authored-by: Johan Dahlberg <[email protected]>
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ptajvar and johandahlberg authored Oct 22, 2024
1 parent 4d38f39 commit 13f6618
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2 changes: 2 additions & 0 deletions src/pixelator/pixeldataset/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -221,6 +221,8 @@ def write_anndata(adata: AnnData, filename: PathType) -> None:

def _compute_sub_communities(
component_edgelist: pd.DataFrame, n_edges_reconnect: int | None = None
) -> pd.Series:
component_edgelist: pd.DataFrame, n_edges_reconnect: int | None = None
):
component_edgelist = (
component_edgelist.groupby(["upia", "upib"], observed=True)["count"]
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