explicitly check n_edges_to_split_doublet exists before using sum

PixelgenTechnologies · Oct 22, 2024 · fb156c9 · fb156c9
1 parent 63b4ef1
commit fb156c9
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/src/pixelator/annotate/__init__.py b/src/pixelator/annotate/__init__.py
@@ -441,6 +441,8 @@ def anndata_metrics(adata: AnnData) -> AnnotateAnndataStatistics:
         metrics["fraction_potential_doublets"] = adata.obs[
             "is_potential_doublet"
         ].mean()
+
+    if "n_edges_to_split_doublet" in adata.obs:
         metrics["n_edges_to_split_potential_doublets"] = adata.obs[
             "n_edges_to_split_doublet"
         ].sum()