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SSRG-v2.0

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@Pombert-JF Pombert-JF released this 16 Mar 19:57
· 28 commits to master since this release

Stable version:

  • Coded minified and cleaned overall + deleted obsolete scripts and files.
  • README.md rewritten for simplicity.
  • Folders restructured for clarity
  • get_SNPs.pl; dropped support for BWA (now obsolete) and FreeBayes (partial implementation was iffy).
  • get_SRA.pl rewritten to take advantage of fasterq-dump.