Audit only

[AlexAxthelm]

• Add args to run_pacta to enable running audit without analysis.
• Update params object with new commands key, which contains key/name pairs (booleans) with which sections of the process should run (here, audit and analysis)

See RMI-PACTA/workflow.pacta.webapp#33 for more details.

[github-actions]

Docker build status

commit_time	git_sha	image
2024-12-17T14:07:16Z	e816b75	ghcr.io/rmi-pacta/workflow.pacta:pr-106

[codecov]

Codecov Report

Attention: Patch coverage is 0% with 36 lines in your changes missing coverage. Please review.

Project coverage is 18.00%. Comparing base (7f1a47d) to head (e816b75).

Files with missing lines	Patch %	Lines
R/run_pacta.R	0.00%	36 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #106      +/-   ##
==========================================
- Coverage   18.35%   18.00%   -0.35%     
==========================================
  Files           4        4              
  Lines         414      422       +8     
==========================================
  Hits           76       76              
- Misses        338      346       +8     

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[jdhoffa]

I will review this in January 😊
@AlexAxthelm please remind me in case I forget!