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Add v6 tutorials#3123

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smk78 wants to merge 174 commits intomainSasView/sasview:mainfrom release_6.0.0SasView/sasview:release_6.0.0Copy head branch name to clipboard

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Commits on Jun 28, 2024

• Update matrix.py

  wpotrzebowski

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• Update requirements.txt

  wpotrzebowski

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• move pinned imports to version-pinned section and add comments in requirements.txt

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• revert positions of imports back into non-pinned section as it seems installers need to install some packages before others

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Commits on Jul 12, 2024

• Emit to the status bar when project loading begins and once it is complete

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Commits on Jul 23, 2024

• Merge release_6.0.0 into release_6.0.0-macos13 and resolve conflict in requirements.txt

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• Allow empty densities in the SLD calculator tool to better match the functionality of the online calculator

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Commits on Jul 31, 2024

• More robust prechecks for the SLD panel to prevent unhandled exceptions

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• Update SLD calculator help file to match latest behavior

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• Give user feedback if density is required

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Commits on Aug 13, 2024

• Merge branch 'release_6.0.0' into release_6.0.0-macos13

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Commits on Aug 15, 2024

• Reset the x and y data transforms when creating new plots to prevent new plots from getting the transforms of previous plots

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Commits on Aug 16, 2024

• INNO installer - do not default to the previously installed directory

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• INNO installer - warn the user if the directory already exists and ensure teh uninstall name is unique from version to version

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Commits on Aug 19, 2024

• Disable and ignore the density field if density is included in the formula.

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• Move try/catch around calculations to capture Assertion error when the formula includes the density and is incomplete

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Commits on Aug 20, 2024

• Check successful launch of sasview on CI (linux)

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• Add additional Ubuntu packages for testing installer

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• Set default settings to display mpl toolbar and hide PD plots

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Commits on Aug 21, 2024

• Merge pull request #3070 from SasView/2816-ci-installer-exit-codes

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• Merge branch 'release_6.0.0' into release_6.0.0-macos13

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• Fixed querying of the data dict at the removal step. Fixes #3015

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• Update matrix.py

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• Update matrix.py

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• Update matrix.py

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• Update matrix.py

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• Update sasview.spec

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• Update sasview.spec

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• Merge pull request #3074 from SasView/3057-default-config-values

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• Update matrix.py

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• Update matrix.py

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• Update matrix.py

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• Update ci.yml

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• icon change, now in the right branch

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• Merge pull request #3042 from SasView/3029-default-install-directory

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• Update ci.yml

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• Update ci.yml

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• remove/disable edit button

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• Update ci.yml

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• Update sasview.spec

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• Update matrix.py

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• Update ci.yml

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• Merge pull request #3022 from SasView/1783-new-plot-reset-transform

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• better checks on result object

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• Attempt to delete all installation folder contents

  krzywon

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• Attempt to delete all installation folder contents

  krzywon

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• Use InstallDelete from INNO instead of code script

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• Merge pull request #3078 from SasView/3058-whatsnew-preferences-release

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  krzywon

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• Update checks to allow some component densities to be given in the formula and still use the global density

  krzywon

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• Catch key errors for amino acid sequences

  krzywon

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• Update documentation for density calculations

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• typo

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• Final documentation edits for SLD calculator

  krzywon

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• Override default INNO directory exists message to let user know the directory will be wiped prior to installation

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• Merge branch 'release_6.0.0' into 2982-sld-calculator-density

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• grab h1 tags from current html page and format into window title

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• swap to using filepath instead of extracting title from html

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• Take the original fix one step further

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Commits on Aug 22, 2024

• check for empty arrays #3085

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• Merge pull request #3079 from SasView/2994-fitting-failshangs-on-some-fits

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• Remove unneeded carriage returns

  krzywon

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• use setVisible to change visibility of edit button for 6.0.0 release

  tsole0

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• use toLocalFile() method to convert QUrl to filepath; simplify try/except block

  tsole0

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• remove one conditional level

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• Merge pull request #3083 from SasView/3072-remove-edit-button

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• Merge pull request #3073 from SasView/2914-project-load-status

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• Merge pull request #3087 from SasView/3085-changing-parameter-values-on-a-model-throws-a-numpy-error

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• ouput for sphinx is now set to correct directory for models. Opens log file in write mode so user can see sphinx log. Toctree still not generating correctly.

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• delete unnecessary imports/redundant function call

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• Merge pull request #3082 from SasView/2nd-option-2832-documentation

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• Merge pull request #3084 from SasView/3016-pd-changes

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• Merge pull request #3081 from SasView/3030-delete-installation-folder-contents

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Commits on Aug 23, 2024

• Merge pull request #3089 from SasView/3015-deleting-data-from-the-data-explorer

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Commits on Aug 26, 2024

• Use standard buttons for the message box to prompt the user all data will be removed from SasView

  krzywon

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• fixes issues when generating TOC. makes some errors that occur when generating RST files non-fatal. removes oddly unnecessary sphinx call in call_regenmodel. re-instates generation of 'custom mod…

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• remove unneeded import

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• prevent multiple documentation regeneration attempts from happening at the same time using locking

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• fix import directory

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• try to force python to write its buffer to file

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• changes do not seem to be effective; reverting

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Commits on Aug 27, 2024

• Merge pull request #2917 from SasView/release_6.0.0-macos13

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• Merge pull request #3093 from SasView/3091-project-load-no-button-clicked

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• refactor regenmodel.py to remove run_sphinx and replace with make_documentation.make_html to reduce number of methods for calling sphinx

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• Fix subprocessing logging so the doc regen window updates as the regen is run

  krzywon

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• fix file processing in generate_html

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• detect deleted plugin models on docs regeneration and remove deleted plugin models from TOC

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Commits on Aug 28, 2024

• Update background and text colors of SLD calculator inputs to better match functionality

  krzywon

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• make DocViewWidget independent window and fix GPUOptions help page.

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• remove print statement

  tsole0

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• dynamically create class variables to prevent old windows being erased when 'Help' is pressed

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• Add new signals used by the doc generation process

  krzywon

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• Emit a signal to other GUI elements when the main application is closed

  krzywon

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• Add a signal to load the log while doc gen is running

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• Return the subprocess runner from generate_html to allow parent processes to handle

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• Update doc gen thread runner to ensure lock and runner are released when application closes and log window is updated

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Commits on Aug 29, 2024

• implement suggested code edits

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• re-implement missing help button in fitting options

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Commits on Aug 30, 2024

• Remove unneeded if statement that was preventing beta calculation from occuring.

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Commits on Sep 4, 2024

• Attempt at fix

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• Should work better now

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Commits on Sep 6, 2024

• Use the calcthread lock instead of a separate lock

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• Pass the target to the thread at run-time rather than on instantiation

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• Remove unneeded code

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Commits on Sep 9, 2024

• Merge remote-tracking branch 'origin/release_6.0.0' into 2952-make-documentation-viewer-accessible

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Commits on Sep 10, 2024

• Merge pull request #2986 from SasView/2982-sld-calculator-density

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Commits on Sep 18, 2024

• Use GuiUtils instead of GuiManager calls for help

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• restore call to GuiManager.showhelp

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• Merge pull request #3097 from SasView/2952-make-documentation-viewer-accessible

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• Merge pull request #3104 from SasView/3086-weird-plot-auto-scaling

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• Merge branch 'release_6.0.0' into 3077-generate-user-model-docs

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Commits on Sep 19, 2024

• Fix circular import

  krzywon

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• Use built-in window for orientation viewer help

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Commits on Sep 20, 2024

• Merge pull request #3100 from SasView/3014-beta-approximation-does-not-run

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Commits on Sep 23, 2024

• Create a global Communicate object that any window can access

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• Pass proper args and kwargs in doc view widget

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• Refresh doc log earlier in doc gen scheme

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• single_files could be empty string, empty list, or None - look for truthiness

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Commits on Sep 24, 2024

• Close thread when program closes

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Commits on Sep 25, 2024

• Fix minor threading issue

  krzywon

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• Set sas opencl os variable prior to running GPU tests

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• Cancel PDB file load on first major error

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Commits on Sep 27, 2024

• Merge pull request #3112 from SasView/various-6.0.0-fixes

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• Merge pull request #3088 from SasView/3077-generate-user-model-docs

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• Update version for RC1

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Commits on Sep 30, 2024

• Disable orientation viewer for Wayland

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• Remove 6.0-specific release notes

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Commits on Oct 1, 2024

• Merge pull request #3113 from SasView/version-for-rc1

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Commits on Oct 3, 2024

• Reset version to match the expect form of 'X.Y.Z' and add a note for future developers

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• Set all versions to 6.0.0 for final release candidate

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• Setup android SDK for windows binary signing

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• Remove SDK installation since it is unnecessary

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Commits on Oct 4, 2024

• Merge pull request #3117 from SasView/fix-rc1

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Commits on Oct 8, 2024

• Merge pull request #3115 from SasView/3114-orientation-viewer-doesnt-clear-itself-on-wayland

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• Include james in the contributors list

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• Set the parent of whatsnew correctly.

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Commits on Oct 9, 2024

• Remove NaNs from any resulting fit, regardless of the source to ensure resulting data is plottable

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• Use tags instead of release branches for sasdata and sasmodels

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Commits on Oct 10, 2024

• Add logo with right format + size.

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• Add metainfo file.

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• Build on Ubuntu 22.04 as well.

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• Added a desktop file.

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• Fix the version.

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• Renamed the icon file.

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• Missing comma on the os release list.

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• Format developer properly.

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Commits on Oct 11, 2024

• Get fitting optimizer from config, not predefined value (I swear I did this before...)

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• Merge branch 'release_6.0.0' into files-for-flatpak

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• Update description for flatpack and add links to repo, etc.

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• Add status bar message when GSC opens waring users it may be behind the main window.

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Commits on Oct 14, 2024

• Description must be in a paragraph.

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• Shorterned the summary.

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• Removed some whitespace.

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• Add a metadata licence.

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• Linter was complaining about dot at end.

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• Fixed a typo.

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• Add release 6.

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• Add a content rating.

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• Added a screenshot for a basic fit.

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• Created dir 'application_metadata' in build_tools.

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• Added a screenshot.

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• Fixed typo on screenshot.

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• Fixed small schema error.

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Commits on Oct 15, 2024

• Add new v6 tutorials to release_6.0.0 branch

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• Adding SciLifeLab logo to About box

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Commits on Oct 16, 2024

• Merge pull request #3124 from SasView/release_6.0.0_scilifelab_logo

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• Remove image file and use image links from commits

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• Merge pull request #3122 from SasView/6.0.0-final-fixes

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Commits on Oct 17, 2024

• Dodgy avoidance of exception.

  jamescrake-merani

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• Posistion should be updated even on right clicks.

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• Use links directly from sasview.org for flatpak

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• Removed the last screenshot.

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• Merge pull request #3121 from SasView/files-for-flatpak

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Commits on Oct 18, 2024

• Added some comments.

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• Merge pull request #3128 from SasView/3127-adding-custom-text-to-a-graph-causes-it-to-go-blank

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