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ShenZhen University
- CN.GuangZhou.ShenZhen University. Health Science Center. BME
Stars
Repository used to write functions, studies and scripts to run and analyze results of parameter sweeps of TVB-AdEx. Also functional connectivity of the DMN in TVB-AdEx
The network structure is based on "Emergence of sensory attenuation based upon the free-energy principle" (https://doi.org/10.1038/s41598-022-18207-7)
ACCURATE CORRESPONDING FIBER TRACT SEGMENTATION VIA FIBERGEOMAP LEARNER
Brain structure-function modelling (DTI & fMRI process)
[ awr-uh-kuhl, or- ] a person who delivers authoritative, wise, or highly regarded and influential pronouncements.
Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning
[MICCAI 2019] Official implementation of the paper "DeepTract: A Probabilistic Deep Learning Framework for White Matter Fiber Tractography" (by Benou and Riklin-Raviv): https://arxiv.org/abs/1812.0…
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
PyTorch implementation of FastSurferCNN
Port of the automatized MRI processing pipeline to Python using Nipype
Code used for postprocessing analyses in manuscript "Modeling brain dynamics in brain tumor patients using The Virtual Brain" (Aerts et al. 2018; eNeuro, 5 (3) ENEURO.0083-18.2018; DOI: https://doi…
Code used for postprocessing analyses in manuscript "Modeling brain dynamics after tumor resection using The Virtual Brain" (Aerts et al. 2019; bioRxiv).
Fast and parallel C implementation of TVB
Integration between TVB and NEST, for multiscale (co)simulations .
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
Validator for the Brain Imaging Data Structure
Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.