Merge pull request #206 from eastgenomics/IN-500-fix-additional-sheet

IN-500 Dont split if additional VCF is empty (#206)
eastgenomics · Nov 7, 2024 · b806c4b · b806c4b
2 parents c45cf27 + 0801604
commit b806c4b
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/resources/home/dnanexus/generate_workbook/utils/vcf.py b/resources/home/dnanexus/generate_workbook/utils/vcf.py
@@ -442,8 +442,8 @@ def read_additional_files(self):
 
                 # call some of the formatting methods for regular vcfs
                 # to get things like split INFO columns and hyperlinks
-
-                file_df = splitColumns().split(file_df)
+                if not file_df.empty:
+                    file_df = splitColumns().split(file_df)
 
                 if self.args.split_hgvs:
                     file_df = self.split_hgvs([file_df])[0]