Format string in output file with plain line-ending character instead of os.linesep

meeko/cli/mk_export.py

@@ -7,7 +7,7 @@
 import gzip
 import pathlib
 import sys
-from os import linesep as eol
+eol="\n"
 import warnings
 import copy
 import numpy as np

meeko/cli/mk_prepare_ligand.py

@@ -7,7 +7,7 @@
 from datetime import datetime
 import io
 import os
-from os import linesep as eol
+eol="\n"
 import sys
 import json
 import tarfile

meeko/cli/mk_prepare_receptor.py

@@ -3,7 +3,7 @@
 import argparse
 import json
 import math
-from os import linesep as eol
+eol="\n"
 import pathlib
 import sys
 

meeko/gridbox.py

@@ -1,4 +1,4 @@
-from os import linesep as eol
+eol="\n"
 import pathlib
 import numpy as np
 

meeko/molsetup.py

@@ -9,7 +9,7 @@
 from collections import defaultdict
 from dataclasses import asdict, dataclass, field
 import json
-from os import linesep as eol
+eol="\n"
 import sys
 import warnings
 from typing import Union

meeko/polymer.py

@@ -3,7 +3,7 @@
 import logging
 import traceback
 from importlib.resources import files
-from os import linesep as eol
+eol="\n"
 from sys import exc_info
 from typing import Union
 from typing import Optional

meeko/preparation.py

@@ -6,7 +6,7 @@
 
 from inspect import signature
 import json
-from os import linesep as eol
+eol="\n"
 import pathlib
 import warnings
 

meeko/receptor_pdbqt.py

@@ -6,7 +6,7 @@
 
 from collections import defaultdict
 import json
-from os import linesep as eol
+eol="\n"
 
 import numpy as np
 from scipy import spatial

meeko/writer.py

@@ -7,7 +7,7 @@
 import sys
 import json
 import math
-from os import linesep as eol
+eol="\n"
 
 import numpy as np
 from rdkit import Chem