Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

SRHD with CR #345

Open
wants to merge 82 commits into
base: main
Choose a base branch
from
Open
Changes from 1 commit
Commits
Show all changes
82 commits
Select commit Hold shift + click to select a range
d137f68
Update the configure.py to fit the CR+SRHD
ChunYen-Chen Mar 15, 2024
498e818
Add the Jet for the SRHD (temporary)
ChunYen-Chen Mar 21, 2024
778ea8d
Let SRHD support CR
ChunYen-Chen Mar 21, 2024
772ebab
Add the function for the SRHD Jet test
ChunYen-Chen Mar 21, 2024
382e747
Let the tests supoport CR
ChunYen-Chen Mar 21, 2024
878fd85
Correct the CR part
ChunYen-Chen Apr 12, 2024
9896760
Bug fix
ChunYen-Chen Apr 12, 2024
ae731d5
Minor update
ChunYen-Chen Apr 15, 2024
925e86b
Update Testproblem
ChunYen-Chen Apr 15, 2024
7938f7a
Update the function inputs
ChunYen-Chen Apr 15, 2024
5c08022
Initialize for SRHD with GRAVITY.
ChunYen-Chen Apr 15, 2024
9f84669
Update the gravity solver
ChunYen-Chen May 10, 2024
ceb85e7
Update the test problem
ChunYen-Chen May 10, 2024
0cd7702
Merge branch 'master' into CR_SRHD
ChunYen-Chen May 10, 2024
fd1369c
Bug fix
ChunYen-Chen May 10, 2024
9e3a722
Bug fix: Wrap Hydro_CheckMinEintInEngy with ifndef SRHD
ChunYen-Chen Jun 17, 2024
edbe6d6
Free memory before return
ChunYen-Chen Jun 17, 2024
b451aae
Fix static array size
ChunYen-Chen Jun 17, 2024
402cca3
Bug fix
ChunYen-Chen Jun 17, 2024
dfaeb3d
Apply CR floor and bug fix
ChunYen-Chen Jun 19, 2024
5f86cdb
Remove debug check
ChunYen-Chen Jun 19, 2024
e0e52ad
Merge branch 'master' into CR_SRHD
ChunYen-Chen Jul 8, 2024
9d1b0fa
Bug fix
ChunYen-Chen Jul 15, 2024
0de4c59
Bug fix
ChunYen-Chen Jul 15, 2024
3c8c25b
Merge branch 'CR_SRHD' of https://github.com/ChunYen-Chen/gamer-fork …
ChunYen-Chen Jul 15, 2024
169ecf8
Bug fix
ChunYen-Chen Jul 16, 2024
5c9abaf
Bug fix
ChunYen-Chen Jul 16, 2024
63abb26
Supress message
ChunYen-Chen Jul 16, 2024
81459b1
Print SRHD variable
ChunYen-Chen Jul 23, 2024
1435b62
Add Unphysical check for SRHD
ChunYen-Chen Jul 23, 2024
e915562
Add perspective projection tool
ChunYen-Chen Aug 13, 2024
44a3228
Ignore perspective projection tool
ChunYen-Chen Aug 13, 2024
46e0e26
Change to silence mode
ChunYen-Chen Aug 13, 2024
da5d7fc
Align
ChunYen-Chen Aug 13, 2024
d688590
Rename test problem
ChunYen-Chen Aug 13, 2024
e6197a0
Restore old Jet test
ChunYen-Chen Aug 13, 2024
1f37d56
Rename test problem
ChunYen-Chen Aug 13, 2024
957522b
Update name
ChunYen-Chen Aug 13, 2024
6d9c6ea
Add comment
ChunYen-Chen Aug 15, 2024
f4782a9
Align
ChunYen-Chen Aug 15, 2024
9019d9b
Remove useless
ChunYen-Chen Aug 15, 2024
27b95be
Update to GAMER style
ChunYen-Chen Aug 15, 2024
3dec066
Add init files for Fermi bubble test problem
ChunYen-Chen Aug 16, 2024
61a0ca3
Add machine check
ChunYen-Chen Aug 19, 2024
0920764
Add global exit function
ChunYen-Chen Aug 19, 2024
e637ee2
Add new test problem comment
ChunYen-Chen Aug 19, 2024
2ba85fb
Remove useless parameters
ChunYen-Chen Aug 19, 2024
ed59b4a
Minor
ChunYen-Chen Aug 19, 2024
fe5f853
Add plot script
ChunYen-Chen Aug 19, 2024
62235aa
Unit fix
ChunYen-Chen Aug 19, 2024
407e1dd
Add profile script
ChunYen-Chen Aug 19, 2024
7ed73c9
Add AMR to FRB data script
ChunYen-Chen Aug 19, 2024
76ecd4a
Remove useless
ChunYen-Chen Aug 19, 2024
7face77
Add X-ray map plot script
ChunYen-Chen Aug 20, 2024
dfa6d6e
Add xray profile plot script
ChunYen-Chen Aug 20, 2024
de17b22
Add gamma ray map script
ChunYen-Chen Aug 20, 2024
8f3f419
Add plot spectrum script
ChunYen-Chen Aug 21, 2024
215c4f6
Update manual
ChunYen-Chen Aug 21, 2024
d4a553a
Merge branch 'master' into CR_SRHD
ChunYen-Chen Aug 21, 2024
3cb485e
Orgnize files
ChunYen-Chen Aug 21, 2024
cc50da4
Fix typo
ChunYen-Chen Aug 21, 2024
da4f526
Use raw string
ChunYen-Chen Aug 22, 2024
d9f6895
Add cooling function table
ChunYen-Chen Aug 22, 2024
fb4731a
Update file location
ChunYen-Chen Aug 22, 2024
796f162
Rename
ChunYen-Chen Aug 22, 2024
8ad2762
Change to md style
ChunYen-Chen Aug 22, 2024
462b115
Change `==` to `is`
ChunYen-Chen Aug 22, 2024
6b40930
Restore the test problem
ChunYen-Chen Aug 22, 2024
680c4bb
Add download script
ChunYen-Chen Aug 22, 2024
cc8aac2
Alignment
ChunYen-Chen Aug 22, 2024
2115a9f
chore(docs): Sync wiki to doc/wiki [skip-cd]
actions-user Aug 22, 2024
2118524
Remove debug msg
ChunYen-Chen Aug 27, 2024
631ae3b
Merge branch 'hyschive:main' into CR_SRHD
ChunYen-Chen Nov 10, 2024
bfa0034
Merge branch 'hyschive:main' into CR_SRHD
ChunYen-Chen Dec 5, 2024
1dafc31
Add generate_make.sh
ChunYen-Chen Dec 5, 2024
3668367
Merge branch 'master' into CR_SRHD
ChunYen-Chen Dec 28, 2024
53e322e
Remove useless variable
ChunYen-Chen Dec 28, 2024
afeb844
Merge branch 'master' into CR_SRHD
ChunYen-Chen Jan 8, 2025
814da14
Minor
ChunYen-Chen Jan 8, 2025
664d7e8
Update link
ChunYen-Chen Jan 8, 2025
b93cedb
Merge branch 'hyschive:main' into CR_SRHD
ChunYen-Chen Jan 16, 2025
d71f05e
[Workflow] Update all parameters wiki page
ChunYen-Chen Jan 16, 2025
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Prev Previous commit
Next Next commit
Update file location
  • Loading branch information
ChunYen-Chen committed Aug 22, 2024
commit fb4731a7a36b39ba6acfa52c9223cc4c69fb3b91
8 changes: 4 additions & 4 deletions example/test_problem/Hydro/FermiBubble/manual
Original file line number Diff line number Diff line change
@@ -58,7 +58,7 @@ mpirun -map-by ppr:2:socket:pe=8 --report-bindings ./gamer_single 1>>log 2>&1
#----------------------------------------------------------------------------------------------------
# Please execute the following commands before the analysis
cd plot_scripts
mv ../robitaille_DL07_PAHISMMix.dat ./
ln -s ../R12
ln -s ../../../tool/analysis/PerspectiveProjection


@@ -109,7 +109,7 @@ cd ../
cp PerspectiveProjection/bin/Project ./

# 3. Execute the projection tool
./Project FRB_Data_000035.h5 100e9 1e6 2.4 robitaille_DL07_PAHISMMix.dat
./Project FRB_Data_000035.h5 100e9 1e6 2.4 R12/robitaille_DL07_PAHISMMix.dat
# NOTE : arg1: name of fixed resolution data in Step1
# arg2: observed photon energy (eV)
# arg3: the cut-off Lorentz factor of CR
@@ -141,14 +141,14 @@ cp PerspectiveProjection/bin/Project gamma_ray_spectrum/
# 3-1. synchrotron emissivities
cd synchrotron_spectrum
ln -s ../FRB_Data_000035.h5
ln -s ../robitaille_DL07_PAHISMMix.dat
ln -s ../../R12
sh get_spectrum.sh
cd ../

# 3-2. gamma ray emissivities
cd gamma_ray_spectrum
ln -s ../FRB_Data_000035.h5
ln -s ../robitaille_DL07_PAHISMMix.dat
ln -s ../../R12
sh get_spectrum.sh
cd ../

Original file line number Diff line number Diff line change
@@ -18,7 +18,7 @@ do
echo "${FileName} exist !!"
else
echo "Running with (ObservedEngyEv=${ObservedEngyEv}, CRindex=${CRindex})"
./Project FRB_Data_000035.h5 $ObservedEngyEv 1.1e6 $CRindex robitaille_DL07_PAHISMMix.dat >& log-$CRindex-$ObservedEngyEv
./Project FRB_Data_000035.h5 $ObservedEngyEv 1.1e6 R12/$CRindex robitaille_DL07_PAHISMMix.dat >& log-$CRindex-$ObservedEngyEv
fi
done < "${temp_file}"
done