kipoi.org

http://kipoi.org

Standard set of data-loaders for training and making predictions for DNA sequence-based models.

Variant effect prediction with a subset of models in Kipoi

React app for demo webapp

Model zoo for genomics

Kipoi's model zoo API

conda and pip related functionality for the kipoi project

This repository contains necessary infrastructure elements for automatically adding and updating docker and singularity images for models and model groups in Kipoi model zoo. These images are pre-activated with a compatible conda environment where all the model (group) specific dependencies have been installed.

Router for Kipoi webapp (routing between Kipoi environments)