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filter out high copy count nodes from layout
compile and e.coli #682: Commit fbcee95 pushed by maickrau
December 14, 2024 12:20 3m 0s r10_only
December 14, 2024 12:20 3m 0s
alndbg resolve parameter
compile and e.coli #681: Commit 45fa2a4 pushed by maickrau
December 12, 2024 11:46 6m 32s r10_only
December 12, 2024 11:46 6m 32s
new alndbg commit
compile and e.coli #680: Commit 9154c4e pushed by maickrau
December 12, 2024 09:14 7m 3s r10_only
December 12, 2024 09:14 7m 3s
fix
compile and e.coli #679: Commit c981e8b pushed by maickrau
December 5, 2024 10:51 6m 8s r10_only
December 5, 2024 10:51 6m 8s
fix memory estimate for chunkgraph
compile and e.coli #678: Commit cbb0c4a pushed by maickrau
December 4, 2024 13:15 6m 55s r10_only
December 4, 2024 13:15 6m 55s
fix
compile and e.coli #677: Commit cb5e93d pushed by maickrau
December 4, 2024 12:25 7m 37s r10_only
December 4, 2024 12:25 7m 37s
no correction, fix awk call
compile and e.coli #676: Commit 83ecec7 pushed by maickrau
December 4, 2024 12:14 7m 16s r10_only
December 4, 2024 12:14 7m 16s
replace graph building with chunkgraph
compile and e.coli #675: Commit 51b1963 pushed by maickrau
December 4, 2024 10:46 7m 36s r10_only
December 4, 2024 10:46 7m 36s
inherit settings and data from previous assembly when using --paths
compile and e.coli #674: Commit 7d57bda pushed by skoren
November 19, 2024 15:30 7m 12s master
November 19, 2024 15:30 7m 12s
remove bashism (#298)
compile and e.coli #673: Commit 4bc7665 pushed by skoren
October 28, 2024 13:54 7m 2s master
October 28, 2024 13:54 7m 2s
fix corner case where haplogap fixing wants an overlap bigger than a …
compile and e.coli #672: Commit eeae3b1 pushed by maickrau
October 28, 2024 13:01 8m 40s master
October 28, 2024 13:01 8m 40s
compatibility_fix
compile and e.coli #671: Commit 4dff6c8 pushed by Dmitry-Antipov
October 22, 2024 15:07 2m 16s v1_fxd
October 22, 2024 15:07 2m 16s
move gap limit handling to scfmap file
compile and e.coli #670: Commit 212f251 pushed by skoren
October 17, 2024 13:20 8m 41s master
October 17, 2024 13:20 8m 41s
update to match gap processing of fasta file
compile and e.coli #669: Commit 89a8379 pushed by skoren
October 16, 2024 21:06 8m 50s master
October 16, 2024 21:06 8m 50s
update version
compile and e.coli #668: Commit 0ffbc34 pushed by skoren
September 27, 2024 15:43 8m 21s master
September 27, 2024 15:43 8m 21s
fx for canu version
compile and e.coli #667: Commit bf219c9 pushed by Dmitry-Antipov
September 26, 2024 18:35 8m 44s master
September 26, 2024 18:35 8m 44s
Further speedup
compile and e.coli #666: Commit f426da4 pushed by Dmitry-Antipov
September 26, 2024 17:54 7m 51s master
September 26, 2024 17:54 7m 51s
try fix conda
compile and e.coli #665: Commit c04c74b pushed by skoren
September 26, 2024 13:56 9m 6s master
September 26, 2024 13:56 9m 6s
fix for non-scaffolding in alternative direction
compile and e.coli #664: Commit 55e9c6e pushed by Dmitry-Antipov
September 26, 2024 02:06 57s master
September 26, 2024 02:06 57s
fix RG
compile and e.coli #663: Commit cf66459 pushed by skoren
September 25, 2024 20:45 1m 10s master
September 25, 2024 20:45 1m 10s
add RG tags to bam to delineate read types
compile and e.coli #662: Commit e6bb621 pushed by skoren
September 25, 2024 18:46 8m 41s master
September 25, 2024 18:46 8m 41s
parse new trm field
compile and e.coli #661: Commit 3bcecbd pushed by skoren
September 24, 2024 18:52 8m 31s master
September 24, 2024 18:52 8m 31s
speedup - counting only necessary distances
compile and e.coli #660: Commit 33c2079 pushed by Dmitry-Antipov
September 24, 2024 01:53 8m 9s master
September 24, 2024 01:53 8m 9s
usage improvements
compile and e.coli #659: Commit 699b666 pushed by Dmitry-Antipov
September 21, 2024 20:05 9m 9s master
September 21, 2024 20:05 9m 9s
fix for cleanup crash
compile and e.coli #658: Commit 4d75aa0 pushed by Dmitry-Antipov
September 21, 2024 19:53 8m 38s master
September 21, 2024 19:53 8m 38s