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mills-lab

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  1. svelter svelter Public

    Approach to identify simple and complex structural genomic rearrangements using a randomized approach

    Python 20 3

  2. dinumt dinumt Public

    Perl 13 8

  3. PALMER PALMER Public

    Forked from WeichenZhou/PALMER

    Pre-mAsking Long reads for Mobile Element inseRtion

    C++ 10 2

  4. vapor vapor Public

    Tool for the validation of structural genomic rearrangements using long read sequence data

    Python 9 2

  5. spectre spectre Public

    Spectral coherence classification of actively translated regions in ribosome profiling sequence data.

    Python 6 3

  6. PALMER_Pipelines PALMER_Pipelines Public

    Forked from WeichenZhou/PALMER_Pipelines

    Command lines and supplements for the project

    C++ 4

Repositories

Showing 10 of 16 repositories
  • SearcHPV Public Forked from WenjinGudaisy/SearcHPV

    An HPV integration point detection tool for targeted capture sequencing data

    mills-lab/SearcHPV’s past year of commit activity
    Python 2 MIT 2 0 0 Updated Oct 30, 2024
  • virusIntegrationViz Public

    This repo includes scripts to visualize the contig at virus integration from SearcHPV

    mills-lab/virusIntegrationViz’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 30, 2024
  • mills-lab.github.io Public

    Website for the Mills Laboratory at the University of Michigan

    mills-lab/mills-lab.github.io’s past year of commit activity
    HTML 0 MIT 2 0 4 Updated Sep 4, 2024
  • numts-and-aging-in-fibroblasts-and-brains Public Forked from WeichenZhou/numts-and-aging-in-fibroblasts-and-brains
    mills-lab/numts-and-aging-in-fibroblasts-and-brains’s past year of commit activity
    Shell 0 1 0 0 Updated Jun 12, 2024
  • Scoval Public Forked from verne91/Scoval_pipeline

    Command line and supplements for the project

    mills-lab/Scoval’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Sep 6, 2023
  • PALMER Public Forked from WeichenZhou/PALMER

    Pre-mAsking Long reads for Mobile Element inseRtion

    mills-lab/PALMER’s past year of commit activity
    C++ 10 MIT 5 0 0 Updated Feb 27, 2023
  • vapor Public

    Tool for the validation of structural genomic rearrangements using long read sequence data

    mills-lab/vapor’s past year of commit activity
    Python 9 2 6 0 Updated Sep 14, 2022
  • dinumt Public
    mills-lab/dinumt’s past year of commit activity
    Perl 13 8 1 0 Updated Oct 29, 2021
  • primate_numt Public

    all scripts used for primate numts

    mills-lab/primate_numt’s past year of commit activity
    R 2 1 0 0 Updated Oct 29, 2021
  • bamnostic Public Forked from betteridiot/bamnostic

    a pure Python multi-version tolerant, runtime and OS-agnostic Binary Alignment Map (BAM) file parser and random access tool

    mills-lab/bamnostic’s past year of commit activity
    Python 0 BSD-3-Clause 19 0 0 Updated Dec 3, 2019
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