Repositories list

• physdm

  Public
  1•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• HGSOC_platinum_response

  Public
  Code for the manuscript "Histopathology and proteomics are synergistic for High-Grade Serous Ovarian Cancer platinum response prediction"

  Jupyter Notebook

  •1•1•0•0•Updated May 27, 2024May 27, 2024

• meeting-presentations

  Public
  Summaries of journal articles and various tools discussed in csabaiBio meetings

  0•0•0•0•Updated Apr 12, 2024Apr 12, 2024

• elte_ml_journal_club

  Public
  Machine learning journal club

  0•6•2•0•Updated Feb 25, 2024Feb 25, 2024

• modellinglab2019

  Public
  Scientific Modelling Computer Lab

  TeX

  •7•1•0•0•Updated Feb 10, 2024Feb 10, 2024

• csabaibio.github.io

  Public
  0•0•0•0•Updated Nov 10, 2023Nov 10, 2023

• SARSCoV2-coinf

  Public
  Supplementary material and analysis pipelines for the detection of co-infection and subclonal recombination in SARS-CoV-2 sequencing data

  HTML

  •0•1•0•0•Updated Oct 31, 2023Oct 31, 2023

• BirdsEyeViewNet

  Public
  BirdsEyeViewNet: Biomimetic transfer learning for pan-cancer computational histopathology

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Sep 30, 2023Sep 30, 2023

• study-material

  Public
  A list of useful links, essays, lectures of machine learning research

  MIT License

  •0•0•0•0•Updated Sep 18, 2023Sep 18, 2023

• hunCRC_scidata

  Public
  Fetch all HunCRC data from Figshare

  Python

  •0•1•0•0•Updated Sep 12, 2023Sep 12, 2023

• rockfish

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated May 30, 2023May 30, 2023

• physdl

  Public
  0•0•0•0•Updated May 23, 2023May 23, 2023

• nightingale_breast_contest_phase2

  Public
  Nightingale High Risk Breast Cancer Prediction Contest Phase 2

  Python

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated May 14, 2023May 14, 2023

• nightingale_breast_contest_phase1

  Public
  Nightingale High Risk Breast Cancer Prediction Contest Phase 1

  Jupyter Notebook

  •

  Apache License 2.0

  •1•0•0•0•Updated Mar 21, 2023Mar 21, 2023

• RBD-AlphaFold2-structures-and-phenotypic-information

  Public
  Scripts needed to reproduce results from the paper "SARS-CoV-2 RBD deep mutational AlphaFold2 structures carry phenotypic information"

  Jupyter Notebook

  •1•0•0•0•Updated Nov 30, 2022Nov 30, 2022

• ai4covid

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Nov 14, 2022Nov 14, 2022

• yolov7

  Public
  Implementation of paper - YOLOv7: Trainable bag-of-freebies sets new state-of-the-art for real-time object detectors

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •4.2k•0•0•0•Updated Oct 17, 2022Oct 17, 2022

• coveo_pcr_primers2021

  Public
  Jupyter Notebook

  •0•2•0•0•Updated Sep 19, 2022Sep 19, 2022

• mammo-data-utils

  Public
  Python

  •0•0•0•0•Updated Sep 19, 2022Sep 19, 2022

• yolov5

  Public
  YOLOv5 🚀 in PyTorch > ONNX > CoreML > TFLite

  Python

  •

  GNU General Public License v3.0

  •16k•0•0•0•Updated Jun 29, 2022Jun 29, 2022

• ai4covid_cosbi_solution

  Public
  Jupyter Notebook

  •0•1•0•1•Updated Mar 30, 2022Mar 30, 2022

• data-exp-vis-2022

  Public
  Data Exploration and Visualization course

  Jupyter Notebook

  •1•0•0•0•Updated Feb 9, 2022Feb 9, 2022

• data-exp-vis-2021

  Public
  Jupyter Notebook

  •2•0•0•0•Updated Jun 23, 2021Jun 23, 2021

• advanced-ml-lab

  Public
  Advanced Machine learning lab

  machine-learningdeep-learningdata-modeling

  The Unlicense

  •0•1•0•0•Updated Feb 18, 2021Feb 18, 2021

• data-exp-vis-2020

  Public
  Course material for Data exploration and visualization

  Jupyter Notebook

  •2•0•0•0•Updated May 8, 2020May 8, 2020

• data-exp-vis-2019

  Public
  Data exploration and visualization course material

  Jupyter Notebook

  •3•0•0•0•Updated Sep 21, 2019Sep 21, 2019

• dslab2018

  Public
  Data Science Computer Lab 2018-19/1

  Jupyter Notebook

  •8•0•0•0•Updated Sep 11, 2019Sep 11, 2019