Release v0.3.0 #57
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Release v0.3.0 #57
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* [WIP] first part of implementation of adaptivity for scalar quantities * [WIP] more code for serial variant of adaptivity * [WIP] Further implementation of adaptivity * [WIP] Further code to handle checkpointing of adaptivity * Formatting * [WIP] Corrections to adaptivity code to get it to work with solver dummy * [WIP] Corrections to adaptivity implementation * Modifying data from micro dummy to ensure that not same data is transferred all the time * Corrections in adaptivity strategy * Add adaptivity to preCICE export output and add integration test for adaptivity (WIP) * Code corrections * Formatting * Formatting * Formatting * New strategy to avoid amending arrays which are being looped from inside of the loop * [WIP] Moving adaptivity functionality to a different class called AdaptiveController * [WIP] correcting mistake in similarity distance calculation * [WIP] close to working solution, solving active sims more smartly * Formatting * Resolving several errors in adaptivity code and moving to serial-explicit scheme for the adaptivity test * Working version of adaptivity test case * Fix solverdummy * [WORKING] First working version of adaptivity * Add adaptivity test to GitHub Actions CI * Formatting * Trying to get the GitHub Action for adaptivity to work * [WIP] Adding parallel variant of adaptivity * Move to using local data sets for adaptivity calculation * Add docstrings to adaptivity related functions and adjust integration test * Removing reference to a function which does not exist * Remove return type hint of type tuple
… same (#21) * Refactoring adaptivity functions into smaller and more readable functions. Adding unit test framework * Add unit test for get_similarity_dists function * Add unit tests for all functions related to adaptivity * Changing apt-get command flag and formatting * Add option to control if adaptivity is computed in every implicit iteration * Formatting * Remove unnecessary input parameter to output() functionality of micro sim * Get active and inactive micro sims more efficiently * Adaptivity seems to be working. Several bugs have been resolved * Cleaning code * Add new output variable adaptivity steps to count how many time steps is a micro sim active in * Add docstrings * Fixing several bugs for use when adaptivity is off * Solving bug for when adaptivity is not used, and some formatting * Fix incorrect variable name in MicroProblem class functions * Move the step to make all sims inactive outside of the time loop (obviously) * Adding docstrings for internal functions of adaptivity * Formatting * Add README for macro-micro-dummy and modfiy adaptivity part of main README
…log only number of active and inactive sims
…ing solverdummy (#22) * Add c++ dummy and move files * Add readme * Modify test action and add c++ dummy * Add some documentation * Rename micro_cpp_dummy file * Update action with new filename * Apply suggestions from code review Co-authored-by: Ishaan Desai <[email protected]> * Remove `get_dims` * Remove `_dims` * Move `micro-manager-config.json` to unify examples * Separate into c++ code into header file and code --------- Co-authored-by: Ishaan Desai <[email protected]>
* Do some syntax changes * Not use // as it may return float * Undo copy commit
* Make a copy of the active sim object which is associated to an inactive sim and put it in the list * Copy list of micro simulations in the association step and return the copied instance * Reduce total time of adaptivity integration test from 10 to 2 * Properly handling copying of active micro sim objects to the associated inactive ones
…emoving all settings
…Ds of the previously inactive simulation (#34)
* [WIP] Add pickling support to C++ solver dummy * Working example of pickling and unpickling of C++ solver dummy * Use py::tuple instead of std::tuple in examples/cpp-dummy/micro_cpp_dummy.cpp Co-authored-by: erikscheurer <[email protected]> * Use py::tuple instead of std::tuple in cpp solverdummy * Correcting wrongly removed code in cpp solver dummy * Remove template call to py::tuple * Remove unnecessary py::make_tuple call --------- Co-authored-by: erikscheurer <[email protected]>
…rning for global adaptivity
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uekerman
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Aug 28, 2023
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Major changes:
This release is compatible with the Python bindings of preCICE: pyprecice v2.5.0.4.