[metagenome] Automated Trial (Prepare) #522
lizgehretci-distro-trial.yaml
on: pull_request
prepare
/
detect-vars
9s
Matrix: rebuild-0 / run_matrix
Matrix: rebuild-1 / run_matrix
Matrix: rebuild-2 / run_matrix
Matrix: rebuild-3 / run_matrix
Matrix: rebuild-4 / run_matrix
Matrix: rebuild-5 / run_matrix
Matrix: rebuild-6 / run_matrix
Waiting for pending jobs
Matrix: rebuild-7 / run_matrix
Waiting for pending jobs
Matrix: build-metapackage / build-metapackage
Waiting for pending jobs
Matrix: test-metapackage / run_matrix
Waiting for pending jobs
upload-builds
/
commit-changes
Annotations
2 errors and 67 warnings
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rebuild-5 / bokulich-lab/RESCRIPt (ubuntu-latest)
Process completed with exit code 1.
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rebuild-5 / bokulich-lab/RESCRIPt (macos-13)
Process completed with exit code 1.
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prepare / detect-vars
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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prepare / prepare
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-0 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-0 / qiime2/q2templates (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / dib-lab/q2-sourmash (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / qiime2/qiime2 (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / qiime2/qiime2 (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / dib-lab/q2-sourmash (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / qiime2/q2templates (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-0 / Finalize generation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-1 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-1 / qiime2/q2-types (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / qiime2/q2-mystery-stew (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / qiime2/q2cli (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / qiime2/q2cli (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / qiime2/q2-types (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / qiime2/q2-mystery-stew (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-1 / Finalize generation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-2 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-2 / qiime2/q2-vizard (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-metadata (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-taxa (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-feature-table (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-composition (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-diversity-lib (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-quality-filter (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-cutadapt (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-demux (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / caporaso-lab/q2-sapienns (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-emperor (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / bokulich-lab/q2-fondue (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-cutadapt (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-diversity-lib (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / caporaso-lab/q2-sapienns (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / bokulich-lab/q2-fondue (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-composition (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-emperor (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-feature-table (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-metadata (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-quality-filter (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-demux (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-vizard (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / qiime2/q2-taxa (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-2 / Finalize generation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-3 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-3 / bokulich-lab/q2-assembly (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-quality-control (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-vsearch (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-sample-classifier (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-diversity (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / bokulich-lab/q2-assembly (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-diversity (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-vsearch (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-sample-classifier (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / qiime2/q2-quality-control (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-3 / Finalize generation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-4 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-4 / qiime2/q2-longitudinal (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / qiime2/q2-feature-classifier (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / qiime2/q2-feature-classifier (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / qiime2/q2-longitudinal (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / bokulich-lab/q2-moshpit (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / bokulich-lab/q2-moshpit (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-4 / Finalize generation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-5 / Set up build matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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rebuild-5 / bokulich-lab/RESCRIPt (ubuntu-latest)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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rebuild-5 / bokulich-lab/RESCRIPt (macos-13)
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
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(Conda Channel) Mirror with patches (19ef0f6c70ba65818a2eff33ea9cab4a0cfbc1ef21c92ef5feb1c6646fa15a7b)
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1.28 KB |
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(Conda Channel) Rebuilt packages
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395 MB |
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(Conda Channel) Rebuilt packages-q2-assembly-macos-13
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17.2 MB |
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(Conda Channel) Rebuilt packages-q2-assembly-ubuntu-latest
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17.1 MB |
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(Conda Channel) Rebuilt packages-q2-composition-macos-13
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603 KB |
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(Conda Channel) Rebuilt packages-q2-composition-ubuntu-latest
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601 KB |
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(Conda Channel) Rebuilt packages-q2-cutadapt-macos-13
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6.33 MB |
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(Conda Channel) Rebuilt packages-q2-cutadapt-ubuntu-latest
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6.29 MB |
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(Conda Channel) Rebuilt packages-q2-demux-macos-13
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385 KB |
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(Conda Channel) Rebuilt packages-q2-demux-ubuntu-latest
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192 KB |
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(Conda Channel) Rebuilt packages-q2-diversity-lib-macos-13
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207 KB |
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(Conda Channel) Rebuilt packages-q2-diversity-lib-ubuntu-latest
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103 KB |
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(Conda Channel) Rebuilt packages-q2-diversity-macos-13
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303 KB |
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(Conda Channel) Rebuilt packages-q2-diversity-ubuntu-latest
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271 KB |
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(Conda Channel) Rebuilt packages-q2-emperor-macos-13
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34.3 KB |
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(Conda Channel) Rebuilt packages-q2-emperor-ubuntu-latest
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17.2 KB |
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(Conda Channel) Rebuilt packages-q2-feature-classifier-macos-13
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155 KB |
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(Conda Channel) Rebuilt packages-q2-feature-classifier-ubuntu-latest
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156 KB |
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(Conda Channel) Rebuilt packages-q2-feature-table-macos-13
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838 KB |
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(Conda Channel) Rebuilt packages-q2-feature-table-ubuntu-latest
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420 KB |
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(Conda Channel) Rebuilt packages-q2-fondue-macos-13
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74.8 MB |
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(Conda Channel) Rebuilt packages-q2-fondue-ubuntu-latest
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78.4 MB |
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(Conda Channel) Rebuilt packages-q2-longitudinal-macos-13
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7.65 MB |
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(Conda Channel) Rebuilt packages-q2-longitudinal-ubuntu-latest
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7.64 MB |
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(Conda Channel) Rebuilt packages-q2-metadata-macos-13
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1.92 MB |
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(Conda Channel) Rebuilt packages-q2-metadata-ubuntu-latest
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981 KB |
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(Conda Channel) Rebuilt packages-q2-moshpit-macos-13
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71.7 MB |
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(Conda Channel) Rebuilt packages-q2-moshpit-ubuntu-latest
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71.7 MB |
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(Conda Channel) Rebuilt packages-q2-mystery-stew-macos-13
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30.7 KB |
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(Conda Channel) Rebuilt packages-q2-mystery-stew-ubuntu-latest
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30.6 KB |
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(Conda Channel) Rebuilt packages-q2-quality-control-macos-13
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828 KB |
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(Conda Channel) Rebuilt packages-q2-quality-control-ubuntu-latest
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828 KB |
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(Conda Channel) Rebuilt packages-q2-quality-filter-macos-13
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67.7 KB |
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(Conda Channel) Rebuilt packages-q2-quality-filter-ubuntu-latest
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33.8 KB |
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(Conda Channel) Rebuilt packages-q2-sample-classifier-macos-13
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636 KB |
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(Conda Channel) Rebuilt packages-q2-sample-classifier-ubuntu-latest
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634 KB |
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(Conda Channel) Rebuilt packages-q2-sapienns-macos-13
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27.2 KB |
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(Conda Channel) Rebuilt packages-q2-sapienns-ubuntu-latest
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27.1 KB |
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(Conda Channel) Rebuilt packages-q2-sourmash-macos-13
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12.2 KB |
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(Conda Channel) Rebuilt packages-q2-sourmash-ubuntu-latest
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12.1 KB |
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(Conda Channel) Rebuilt packages-q2-taxa-macos-13
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226 KB |
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(Conda Channel) Rebuilt packages-q2-taxa-ubuntu-latest
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113 KB |
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(Conda Channel) Rebuilt packages-q2-types-macos-13
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12 MB |
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(Conda Channel) Rebuilt packages-q2-types-ubuntu-latest
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12 MB |
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(Conda Channel) Rebuilt packages-q2-vizard-macos-13
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93.6 KB |
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(Conda Channel) Rebuilt packages-q2-vizard-ubuntu-latest
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46.8 KB |
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(Conda Channel) Rebuilt packages-q2-vsearch-macos-13
|
636 KB |
|
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(Conda Channel) Rebuilt packages-q2-vsearch-ubuntu-latest
|
638 KB |
|
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(Conda Channel) Rebuilt packages-q2cli-macos-13
|
165 KB |
|
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(Conda Channel) Rebuilt packages-q2cli-ubuntu-latest
|
165 KB |
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(Conda Channel) Rebuilt packages-q2templates-macos-13
|
190 KB |
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(Conda Channel) Rebuilt packages-q2templates-ubuntu-latest
|
190 KB |
|
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(Conda Channel) Rebuilt packages-qiime2-macos-13
|
691 KB |
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(Conda Channel) Rebuilt packages-qiime2-ubuntu-latest
|
687 KB |
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(Environment File) Metapackage seed environment
|
760 Bytes |
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(GHA Matrix) Packages to rebuild and test
|
730 Bytes |
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(Reverse Dependencies) Packages to rebuild and their reverse dependencies
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813 Bytes |
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(Version Files) Rebuilt version info-q2-assembly-macos-13
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172 Bytes |
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(Version Files) Rebuilt version info-q2-assembly-ubuntu-latest
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172 Bytes |
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(Version Files) Rebuilt version info-q2-composition-macos-13
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181 Bytes |
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(Version Files) Rebuilt version info-q2-composition-ubuntu-latest
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181 Bytes |
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(Version Files) Rebuilt version info-q2-cutadapt-macos-13
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172 Bytes |
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(Version Files) Rebuilt version info-q2-cutadapt-ubuntu-latest
|
172 Bytes |
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(Version Files) Rebuilt version info-q2-demux-macos-13
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163 Bytes |
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(Version Files) Rebuilt version info-q2-demux-ubuntu-latest
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163 Bytes |
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(Version Files) Rebuilt version info-q2-diversity-lib-macos-13
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187 Bytes |
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(Version Files) Rebuilt version info-q2-diversity-lib-ubuntu-latest
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187 Bytes |
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(Version Files) Rebuilt version info-q2-diversity-macos-13
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175 Bytes |
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(Version Files) Rebuilt version info-q2-diversity-ubuntu-latest
|
175 Bytes |
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(Version Files) Rebuilt version info-q2-emperor-macos-13
|
169 Bytes |
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(Version Files) Rebuilt version info-q2-emperor-ubuntu-latest
|
169 Bytes |
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(Version Files) Rebuilt version info-q2-feature-classifier-macos-13
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202 Bytes |
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(Version Files) Rebuilt version info-q2-feature-classifier-ubuntu-latest
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202 Bytes |
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(Version Files) Rebuilt version info-q2-feature-table-macos-13
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187 Bytes |
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(Version Files) Rebuilt version info-q2-feature-table-ubuntu-latest
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187 Bytes |
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(Version Files) Rebuilt version info-q2-fondue-macos-13
|
166 Bytes |
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(Version Files) Rebuilt version info-q2-fondue-ubuntu-latest
|
166 Bytes |
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(Version Files) Rebuilt version info-q2-longitudinal-macos-13
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184 Bytes |
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(Version Files) Rebuilt version info-q2-longitudinal-ubuntu-latest
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184 Bytes |
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(Version Files) Rebuilt version info-q2-metadata-macos-13
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172 Bytes |
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(Version Files) Rebuilt version info-q2-metadata-ubuntu-latest
|
172 Bytes |
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(Version Files) Rebuilt version info-q2-moshpit-macos-13
|
180 Bytes |
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(Version Files) Rebuilt version info-q2-moshpit-ubuntu-latest
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180 Bytes |
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(Version Files) Rebuilt version info-q2-mystery-stew-macos-13
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184 Bytes |
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(Version Files) Rebuilt version info-q2-mystery-stew-ubuntu-latest
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184 Bytes |
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(Version Files) Rebuilt version info-q2-quality-control-macos-13
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193 Bytes |
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(Version Files) Rebuilt version info-q2-quality-control-ubuntu-latest
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193 Bytes |
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(Version Files) Rebuilt version info-q2-quality-filter-macos-13
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190 Bytes |
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(Version Files) Rebuilt version info-q2-quality-filter-ubuntu-latest
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190 Bytes |
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