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1. gps-visualiser gps-visualiser Public

   Summarisation of the findings in GPS (Global Pneumococcal Sequencing Project) country-specific analysis papers in a visual format.

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2. gps-database-processor gps-database-processor Public

   All-in-one tool to validate GPS (Global Pneumococcal Sequencing Project) database source files, generate inferred data, and export GPS Database Overview and Monocle compatible files

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3. gps-database-overview gps-database-overview Public

   Visualisation of publicly available GPS (Global Pneumococcal Sequencing Project) data that can be accessed via Monocle.

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4. gps-project-website-react gps-project-website-react Public

   Rebuild of the GPS Project Website in React.js

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5. cps_extractor cps_extractor Public

   NextFlow pipeline which extracts capsular locus sequences (CPS) and checks for disruptive mutations

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6. AtoZ_PneumoGenomics AtoZ_PneumoGenomics Public

   Materials for the "Pneumococcal Genomics A to Z" workshop at ISPPD 2024

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