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Convert the KIDA UVA 2014 network to Astrochem format #38

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Convert the KIDA UVA 2014 network to Astrochem format #38

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@smaret smaret commented May 5, 2015

This PR implements the conversion of the KIDA UVA 2014 network to Astrochem format, and its inclusion in the distribution. There are several points to adress:

smaret added 5 commits May 5, 2015 08:39
@smaret
Add the latest network from KIDA
e6aa9c1
@smaret
Remove references to chmconvert_local
08caf5e
@smaret
Fix the conversion of KIDA networks
a23e325 
The format used in KIDA network as changed. Fix the fromfile() method
accordingly.
@smaret
Add the temperature range in reaction objects
687722c 
If the network file contain some validity range for the temperature,
include it in the reaction object. For the moment only KIDA networks are
supported.
@smaret
Add a --temperature option in chmconvert
bb9fdcb 
With this option, the reactions that are not valid at a given
temperature are ignored. This allows to convert networks from KIDA that
contain several reaction rates for each reaction, which each of this
rate corresponding to a different temperature range.
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smaret commented May 5, 2015

It looks like the reaction types / formulae in KIDA have changed: photodissociation used to be 3, and it's now 2. There are also two new types, ionpol1 and ionpol2 that needs to be implemented in Astrochem.

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smaret commented May 5, 2015

The KIDA UVA 2014 network also contain an (undocumented) type 0 which corresponds to type -1 in OSU. There are also types 10 and 11 for H2 formation.

@smaret smaret changed the title Convert networks from the KIDA database to Astrochem format Convert the KIDA UVA 2014 network to Astrochem format May 5, 2015
@smaret smaret added this to the Release 0.7 milestone May 14, 2015
@smaret smaret force-pushed the kida branch 2 times, most recently from f288003 to e72d27d Compare May 16, 2015 15:04
@smaret smaret self-assigned this May 18, 2015
@smaret smaret modified the milestones: Release 0.7, Release 0.8 Jul 15, 2015
@smaret smaret mentioned this pull request Feb 17, 2016
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@smaret smaret removed their assignment Jun 24, 2019
@smaret smaret removed this from the Release 0.8 milestone Nov 13, 2019
@smaret smaret added this to the Release 0.9 milestone Nov 27, 2019
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smaret commented Nov 27, 2019

Related issue: #70

@smaret smaret removed this from the Release 0.9 milestone Oct 21, 2021
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