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PR4: Add helpmenu option #1628

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shrivaths16
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@shrivaths16 shrivaths16 commented Dec 7, 2023

Description

Add help menu option to display the announcement manually as well. This is the 4th PR that solves the issuev #1563

Types of changes

  • Bugfix
  • New feature
  • Refactor / Code style update (no logical changes)
  • Build / CI changes
  • Documentation Update
  • Other (explain)

Does this address any currently open issues?

Outside contributors checklist

  • Review the guidelines for contributing to this repository
  • Read and sign the CLA and add yourself to the authors list
  • Make sure you are making a pull request against the develop branch (not main). Also you should start your branch off develop
  • Add tests that prove your fix is effective or that your feature works
  • Add necessary documentation (if appropriate)

Thank you for contributing to SLEAP!

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Summary by CodeRabbit

  • New Features

    • Added new actions "Announcements" and "What's New?" to the help menu.
    • Implemented functionality to open the latest bulletin.
    • Added a new entry for "Lili Karashchuk" to the AUTHORS file.
  • Bug Fixes

    • Modified logic for handling animal tracks and instances in deeplabcut.py.
    • Adjusted the encoding and storage of video frames in the HDF5 file in sleap/io/video.py.
  • Tests

    • Modified logic of the test case test_import_labels_from_dlc_folder in test_commands.py.
    • Added a new test case test_maudlc in test_commands.py.

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coderabbitai bot commented Dec 7, 2023

Walkthrough

The recent changes enhance the SLEAP application's user interface by adding new help menu options that provide announcements and updates. The backend logic now supports these features along with improved track handling in DeepLabCut file processing. The AUTHORS file is updated with a new contributor, and the video encoding process for HDF5 storage has been refined. Testing has been updated to reflect these new functionalities and expected behaviors.

Changes

File Path Change Summary
sleap/gui/app.py, sleap/gui/commands.py Modified new_instance_menu_action to add "Announcements" and "What's New?" actions to the help menu. Added a separator to the help menu. Added showBulletin method and reorganized code in several classes. Extensively modified AddInstance class.
AUTHORS Added new author Lili Karashchuk.
sleap/io/format/deeplabcut.py Added imports, implemented new track handling logic, and added missing video file handling.
sleap/io/video.py Modified to_hdf5 function for frame encoding in HDF5 storage.
sleap/nn/system.py Adjusted GPU "Initialized" status output formatting.
tests/gui/test_commands.py Updated a test case and added a new one for MA-DLC processing.

Poem

🐇 "In the code where we hop,
🌟 New features now pop,
📚 Help menus expand, tracks align,
🎉 A SLEAP forward, in code we entwine."

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@shrivaths16 shrivaths16 changed the title Add helpmenu option PR4: Add helpmenu option Dec 7, 2023
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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between f7c510d and fb0f44e.
Files selected for processing (2)
  • sleap/gui/app.py (1 hunks)
  • sleap/gui/commands.py (2 hunks)
Additional comments: 5
sleap/gui/app.py (2)
  • 1023-1027: The summary incorrectly states that the "Announcements" action was added within the new_instance_menu_action function. The code shows that the action was added within the _create_menus method.

  • 1023-1027: The addition of the "Announcements" action to the help menu is correctly implemented and follows the established pattern for adding new menu actions.

sleap/gui/commands.py (3)
  • 627-629: The summary mentions the addition of a do_action method to the ShowBulletin class, but this method is not present in the provided code. Please verify if this method was intended to be included or if the summary needs to be updated.

  • 627-629: The addition of the showBulletin method to the AppCommand class is correctly implemented as per the summary.

  • 629-629: Please ensure that the bulletin_dialog method is defined within the context.app class, as it is being called within the showBulletin method.

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codecov bot commented Dec 7, 2023

Codecov Report

Attention: 2 lines in your changes are missing coverage. Please review.

Comparison is base (b5d5139) 73.46% compared to head (4b51812) 73.46%.

Files Patch % Lines
sleap/gui/commands.py 66.66% 2 Missing ⚠️
Additional details and impacted files
@@                         Coverage Diff                         @@
##           shrivaths/changelog-announcement-3    #1628   +/-   ##
===================================================================
  Coverage                               73.46%   73.46%           
===================================================================
  Files                                     135      135           
  Lines                                   24131    24139    +8     
===================================================================
+ Hits                                    17728    17734    +6     
- Misses                                   6403     6405    +2     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between fd81643 and b5980fe.
Files ignored due to filter (1)
  • environment_mac.yml
Files selected for processing (1)
  • sleap/gui/commands.py (2 hunks)
Files skipped from review as they are similar to previous changes (1)
  • sleap/gui/commands.py

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between b5980fe and 0dcd27a.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)
Additional comments: 1
sleap/gui/app.py (1)
  • 1026-1027: The addition of the "What's New?" action to the helpMenu is correctly implemented and linked to the showBulletin command. Ensure that the showBulletin method in the CommandContext class is properly defined and handles the action as expected.
Verification successful

The showBulletin method exists within the sleap/gui/commands.py file. This confirms that the method linked to the "What's New?" action in the helpMenu is implemented in the codebase.

Scripts Executed

The following scripts were executed for the analysis:


Script:

#!/bin/bash
# Verify that the showBulletin method exists and is properly defined in CommandContext.
ast-grep --lang python --pattern $'class CommandContext {
  $$$
  showBulletin($_) {
    $$$
  }
  $$$
}'

Length of output: 451



Script:

#!/bin/bash
# Search for the showBulletin method in the codebase to verify its existence and implementation.
rg "def showBulletin"

Length of output: 73

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between 0dcd27a and 184e7b8.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)
Files skipped from review due to trivial changes (1)
  • sleap/gui/app.py

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Review Status

Actionable comments generated: 1

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between 184e7b8 and 835d3cf.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)

Comment on lines +1028 to +1030
helpMenu.addSeparator()
helpMenu.addAction("What's New?", self.commands.showBulletin)

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It's good to see the addition of a "What's New?" action to the help menu. To ensure robustness, consider verifying that self.commands.showBulletin is callable before adding it to the action. This can prevent potential runtime errors if the method is not defined or incorrectly implemented.

if callable(getattr(self.commands, 'showBulletin', None)):
    helpMenu.addAction("What's New?", self.commands.showBulletin)

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between 835d3cf and e800037.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)
Additional comments: 2
sleap/gui/app.py (2)
  • 1028-1030: The addition of the "What's New?" action to the help menu is implemented as expected. The previous suggestion to verify that self.commands.showBulletin is callable before adding it to the action has been addressed in the code. This ensures that the application will not encounter a runtime error if the method is not defined or implemented incorrectly.

  • 1025-1033: > Note: This review was outside the patches, so it was mapped to the patch with the greatest overlap. Original lines [1-1030]

After a thorough review of the MainWindow class, no additional changes related to the "What's New?" action or other issues have been identified. The class is well-structured, and the existing methods appear to be consistent with the overall design of the application.

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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between e800037 and ac4fced.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)
Files skipped from review as they are similar to previous changes (1)
  • sleap/gui/app.py

@shrivaths16 shrivaths16 requested review from talmo and roomrys January 13, 2024 05:40
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Review Status

Actionable comments generated: 0

Configuration used: CodeRabbit UI

Commits Files that changed from the base of the PR and between ac4fced and 8d96262.
Files selected for processing (1)
  • sleap/gui/app.py (1 hunks)
Files skipped from review as they are similar to previous changes (1)
  • sleap/gui/app.py

@shrivaths16 shrivaths16 merged commit 150453d into shrivaths/changelog-announcement-3 Jan 19, 2024
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2 participants