Starting from Previous State Files
The input mark-up allows you to use existing state files as the initial condition for a new simulation.
This is different from the restartPreviousRun parameter above, because these inputs are meant for use in a new simulation starting from time 0 rather than for restarting a previous simulation. Setting the flag to true or false will use the input file as needed; just be sure that the path to the input file is correct (it is best to copy the input file to the local directory). Note that the input files MUST be consistent with the agent and solute descriptions defined later in the protocol file, or otherwise the simulation will give an error.