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Add function agg_by_strata, which is a generalized version of the compute_freq_by_strata CI #1822: Pull request #659 synchronize by jkgoodrich
January 16, 2024 18:47 2m 15s jg/agg_by_strata
jg/agg_by_strata
January 16, 2024 18:47 2m 15s
Functions to process, filter, annotate and aggregate variants by transcript expression (get the pext scores per variant) CI #1821: Pull request #651 synchronize by KoalaQin
January 16, 2024 17:33 2m 26s qh/tx_annotate_mt
qh/tx_annotate_mt
January 16, 2024 17:33 2m 26s
Function to get max pext per gene CI #1820: Pull request #663 synchronize by KoalaQin
January 14, 2024 15:51 2m 12s qh/max_per_gene
qh/max_per_gene
January 14, 2024 15:51 2m 12s
Add functions to pull out worst after aggregation by consequences CI #1819: Pull request #656 synchronize by KoalaQin
January 14, 2024 15:44 2m 15s qh/pull_worst
qh/pull_worst
January 14, 2024 15:44 2m 15s
Function to get max pext per gene CI #1818: Pull request #663 synchronize by KoalaQin
January 14, 2024 03:59 2m 11s qh/max_per_gene
qh/max_per_gene
January 14, 2024 03:59 2m 11s
Function to get max pext per gene CI #1817: Pull request #663 synchronize by KoalaQin
January 14, 2024 03:37 2m 11s qh/max_per_gene
qh/max_per_gene
January 14, 2024 03:37 2m 11s
Function to get max pext per gene CI #1816: Pull request #663 synchronize by KoalaQin
January 14, 2024 02:59 2m 23s qh/max_per_gene
qh/max_per_gene
January 14, 2024 02:59 2m 23s
Add functions to pull out worst after aggregation by consequences CI #1815: Pull request #656 synchronize by KoalaQin
January 14, 2024 02:53 2m 11s qh/pull_worst
qh/pull_worst
January 14, 2024 02:53 2m 11s
Function to get max pext per gene CI #1814: Pull request #663 synchronize by KoalaQin
January 14, 2024 02:44 2m 7s qh/max_per_gene
qh/max_per_gene
January 14, 2024 02:44 2m 7s
Functions to process, filter, annotate and aggregate variants by transcript expression (get the pext scores per variant) CI #1813: Pull request #651 synchronize by KoalaQin
January 14, 2024 01:54 2m 14s qh/tx_annotate_mt
qh/tx_annotate_mt
January 14, 2024 01:54 2m 14s
Function to get max pext per gene CI #1812: Pull request #663 synchronize by KoalaQin
January 14, 2024 01:36 3m 20s qh/max_per_gene
qh/max_per_gene
January 14, 2024 01:36 3m 20s
Function to get max pext per gene CI #1811: Pull request #663 synchronize by KoalaQin
January 13, 2024 23:11 2m 21s qh/max_per_gene
qh/max_per_gene
January 13, 2024 23:11 2m 21s
Function to get max pext per gene CI #1810: Pull request #663 synchronize by KoalaQin
January 13, 2024 23:05 2m 18s qh/max_per_gene
qh/max_per_gene
January 13, 2024 23:05 2m 18s
Functions to process, filter, annotate and aggregate variants by transcript expression (get the pext scores per variant) CI #1809: Pull request #651 synchronize by KoalaQin
January 13, 2024 22:48 2m 13s qh/tx_annotate_mt
qh/tx_annotate_mt
January 13, 2024 22:48 2m 13s
Functions to process, filter, annotate and aggregate variants by transcript expression (get the pext scores per variant) CI #1808: Pull request #651 synchronize by KoalaQin
January 13, 2024 22:36 2m 10s qh/tx_annotate_mt
qh/tx_annotate_mt
January 13, 2024 22:36 2m 10s
Rearrange and enforce adj_group and group_membership being on the sam… CI #1807: Pull request #666 opened by mike-w-wilson
January 11, 2024 21:29 2m 13s mw/agg_by_strata_pr_fb
mw/agg_by_strata_pr_fb
January 11, 2024 21:29 2m 13s
Bump jinja2 from 3.1.2 to 3.1.3 in /docs CI #1806: Pull request #665 opened by dependabot bot
January 11, 2024 21:16 2m 30s dependabot/pip/docs/jinja2-3.1.3
dependabot/pip/docs/jinja2-3.1.3
January 11, 2024 21:16 2m 30s
Minor GKS formatting changes and addition of gnomAD flags to annotation CI #1805: Pull request #617 synchronize by theferrit32
January 11, 2024 18:13 2m 20s theferrit32:kf/gks-cg-annotations
theferrit32:kf/gks-cg-annotations
January 11, 2024 18:13 2m 20s
Minor GKS formatting changes and addition of gnomAD flags to annotation CI #1804: Pull request #617 synchronize by theferrit32
January 11, 2024 18:02 2m 8s theferrit32:kf/gks-cg-annotations
theferrit32:kf/gks-cg-annotations
January 11, 2024 18:02 2m 8s
Minor GKS formatting changes and addition of gnomAD flags to annotation CI #1803: Pull request #617 synchronize by theferrit32
January 11, 2024 17:49 2m 4s theferrit32:kf/gks-cg-annotations
theferrit32:kf/gks-cg-annotations
January 11, 2024 17:49 2m 4s
Function to get max pext per gene CI #1802: Pull request #663 synchronize by KoalaQin
January 11, 2024 15:06 2m 13s qh/max_per_gene
qh/max_per_gene
January 11, 2024 15:06 2m 13s
Function to get max pext per gene CI #1801: Pull request #663 opened by KoalaQin
January 11, 2024 04:26 2m 19s qh/max_per_gene
qh/max_per_gene
January 11, 2024 04:26 2m 19s
Add compute_stats_per_ref_site to generalize computation of aggregate stats at all sites in a reference Table CI #1800: Pull request #662 opened by jkgoodrich
January 11, 2024 00:07 2m 20s jg/generalize_stat_compute_at_all_ref_sites
jg/generalize_stat_compute_at_all_ref_sites
January 11, 2024 00:07 2m 20s
Add densify_all_reference_sites to perform a densify at all sites in a reference HT CI #1799: Pull request #661 opened by jkgoodrich
January 10, 2024 21:51 2m 10s jg/generalize_densify_at_all_ref_sites
jg/generalize_densify_at_all_ref_sites
January 10, 2024 21:51 2m 10s
Clean up compute_coverage_stats, change it to use agg_by_strata and have an optional group_membership_ht parameter CI #1798: Pull request #660 synchronize by jkgoodrich
January 10, 2024 21:08 2m 13s jg/clean_up_coverage_code
jg/clean_up_coverage_code
January 10, 2024 21:08 2m 13s
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